Name: freecontact
Contact: Laszlo Kajan <lkajan@rostlab.org>
Homepage: http://rostlab.org/
Reference:
 - Author: László Kaján and Thomas A. Hopf and Matúš Kalaš and Debora S. Marks and Burkhard Rost
   Title: 'FreeContact: ...'
   Journal: BMC Bioinformatics
   Year: '201?'
# lkajan: [DOAP] http://usefulinc.com/ns/doap#
# lkajan: I used the EDAM ontology [1] for the terms below. I browsed it on-line at [2].
# lkajan: [1] http://edamontology.org/EDAM.owl
# lkajan: [2] http://bioportal.bioontology.org/ontologies/49579?p=terms
Software:
 - Name: freecontact
   Topic:
     - Protein structure prediction: http://edamontology.org/topic_0172
     - Protein sequence analysis: http://edamontology.org/topic_0639
   Function:
     - Residue interaction prediction: http://edamontology.org/operation_0272
   Input:
     Data:
       - Sequence alignment (protein): http://edamontology.org/data_1384
     Format:
       - A2M
   Output:
     Data:
       - Protein contact map: http://edamontology.org/data_1547
     Format:
       - BioXSD: 'http://edamontology.org/format_2352'
       - PFRMAT RR
   # lkajan: Interface terms are from the Software Ontology <http://theswo.sourceforge.net/>.
   # lkajan: http://bioportal.bioontology.org/ontologies/50167?p=terms
   # lkajan: http://theswo.svn.sourceforge.net/viewvc/theswo/trunk/src/release/swoinowl/inferredswo/swo_inferred.owl
   Interface:
     - Command Line Interface: http://www.ebi.ac.uk/swo/interface/SWO_9000053

# vim:et:ts=2:ai:syntax=yaml:
