USAGE:
axe-demux [-mzc2pt] -b (-f [-r] | -i) (-F [-R] | -I)
axe-demux -h
axe-demux -v

OPTIONS:
    -m, --mismatch	Maximum hamming distance mismatch. [int, default 1]
    -z, --ziplevel	Gzip compression level, or 0 for plain text [int, default 0]
    -c, --combinatorial	Use combinatorial barcode matching. [flag, default OFF]
    -p, --permissive	Don't error on barcode mismatch confict, matching only
                    	exactly for conficting barcodes. [flag, default OFF]
    -2, --trim-r2	Trim barcode from R2 read as well as R1. [flag, default OFF]
    -b, --barcodes	Barcode file. See --help for example. [file]
    -f, --fwd-in	Input forward read. [file]
    -F, --fwd-out	Output forward read prefix. [file]
    -r, --rev-in	Input reverse read. [file]
    -R, --rev-out	Output reverse read prefix. [file]
    -i, --ilfq-in	Input interleaved paired reads. [file]
    -I, --ilfq-out	Output interleaved paired reads prefix. [file]
    -t, --table-file	Output a summary table of demultiplexing statistics to file. [file]
    -h, --help		Print this usage plus additional help.
    -V, --version	Print version string.
    -v, --verbose	Be more verbose. Additive, -vv is more vebose than -v.
    -q, --quiet		Be very quiet.
