Spec
GlobalAlignSelects a global alignment method to join a JournaledString to a global reference sequence.
Selects a global alignment method to join a JournaledString to a global reference sequence.
| Extends | JoinConfig |
|---|---|
| All Extended | JoinConfig |
| Defined in | <seqan/journaled_set.h> |
| Signature |
template <[typename TStrategy]>
struct GlobalAlign;
|
Template Parameters
TStrategy |
The strategy used to compute the journal (can be one of JournaledCompact and JournaledManhattan, defaults to JournaledManhattan). |
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Detailed Description
If JournaledManhattan is selected, then the resulting JournaledString consists of one insertion node covering the complete joined sequence.