Typedef Blosum30BLOSUM30 scoring matrix.
BLOSUM30 scoring matrix.
| Defined in | <seqan/score.h> |
|---|---|
| Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecBlosum30> > Blosum30;
|
Overview
A 4
B 0 5
C -3 -2 17
D 0 5 -3 9
E 0 0 1 1 6
F -2 -3 -3 -5 -4 10
G 0 0 -4 -1 -2 -3 8
H -2 -2 -5 -2 0 -3 -3 14
I 0 -2 -2 -4 -3 0 -1 -2 6
J -1 -2 -1 -3 -2 1 -2 -2 4 4
K 0 0 -3 0 2 -1 -1 -2 -2 -2 4
L -1 -1 0 -1 -1 2 -2 -1 2 3 -2 4
M 1 -2 -2 -3 -1 -2 -2 2 1 2 2 2 6
N 0 4 -1 1 -1 -1 0 -1 0 -1 0 -2 0 8
X 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1
P -1 -2 -3 -1 1 -4 -1 1 -3 -3 1 -3 -4 -3 -1 11
Q 1 -1 -2 -1 2 -3 -2 0 -2 -2 0 -2 -1 -1 0 0 8
R -1 -2 -2 -1 -1 -1 -2 -1 -3 -3 1 -2 0 -2 -1 -1 3 8
S 1 0 -2 0 0 -1 0 -1 -1 -2 0 -2 -2 0 0 -1 -1 -1 4
T 1 0 -2 -1 -2 -2 -2 -2 0 0 -1 0 0 1 0 0 0 -3 2 5
U 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1
V 1 -2 -2 -2 -3 1 -3 -3 4 3 -2 1 0 -2 0 -4 -3 -1 -1 1 0 5
W -5 -5 -2 -4 -1 1 1 -5 -3 -3 -2 -2 -3 -7 -2 -3 -1 0 -3 -5 -2 -3 20
Y -4 -3 -6 -1 -2 3 -3 0 -1 1 -1 3 -1 -4 -1 -2 -1 0 -2 -1 -1 1 5 9
Z 0 0 0 0 5 -4 -2 0 -3 -2 1 -1 -1 -1 0 0 4 0 -1 -1 0 -3 -1 -2 4
X 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 0 -2 -1 0 -1
* -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 1
A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *