********************************************************************************
MEME - Motif discovery tool
********************************************************************************
MEME version 5.5.3 (Release date: Sat Jun 10 16:19:38 2023 -0700)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey and Charles Elkan,
"Fitting a mixture model by expectation maximization to
discover motifs in biopolymers",
Proceedings of the Second International Conference on Intelligent Systems
for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994.
********************************************************************************


********************************************************************************
TRAINING SET
********************************************************************************
PRIMARY SEQUENCES= common/lipocalin.s
CONTROL SEQUENCES= --none--
ALPHABET= ACDEFGHIKLMNPQRSTVWY
Sequence name            Weight Length  Sequence name            Weight Length  
-------------            ------ ------  -------------            ------ ------  
ICYA_MANSE               1.0000    189  LACB_BOVIN               1.0000    178  
BBP_PIEBR                1.0000    173  RETB_BOVIN               1.0000    183  
MUP2_MOUSE               1.0000    180  
********************************************************************************

********************************************************************************
COMMAND LINE SUMMARY
********************************************************************************
This information can also be useful in the event you wish to report a
problem with the MEME software.

command: meme -p 4 common/lipocalin.s -oc results/meme18 -mod anr -protein -nmotifs 2 -objfun classic -minw 8 -nostatus 

model:  mod=           anr    nmotifs=         2    evt=           inf
objective function:           em=       E-value of product of p-values
                              starts=   E-value of product of p-values
width:  minw=            8    maxw=           50
nsites: minsites=        2    maxsites=       25    wnsites=       0.8
theta:  spmap=         pam    spfuzz=        120
em:     prior=       megap    b=            4515    maxiter=        50
        distance=    1e-05
trim:   wg=             11    ws=              1    endgaps=       yes
data:   n=             903    N=               5
sample: seed=            0    hsfrac=          0
        searchsize=    903    norand=         no    csites=       1000
Dirichlet mixture priors file: prior30.plib
Letter frequencies in dataset:
A 0.072 C 0.0288 D 0.0687 E 0.0775 F 0.0432 G 0.0576 H 0.0255 I 0.0476 K 0.0864 
L 0.0875 M 0.0177 N 0.0532 P 0.0321 Q 0.0288 R 0.031 S 0.0587 T 0.0476 V 0.0698 
W 0.0166 Y 0.0498 
Background letter frequencies (from file dataset with add-one prior applied):
A 0.0715 C 0.0293 D 0.0683 E 0.0769 F 0.0433 G 0.0574 H 0.026 I 0.0477 K 0.0856 
L 0.0867 M 0.0184 N 0.0531 P 0.0325 Q 0.0293 R 0.0314 S 0.0585 T 0.0477 V 0.0693 
W 0.0173 Y 0.0498 
Background model order: 0
********************************************************************************


********************************************************************************
MOTIF HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1	width =  28  sites =   3  llr = 196  E-value = 1.5e-004
********************************************************************************
--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 Description
--------------------------------------------------------------------------------
Simplified        A  :::3::::::::::::33:7:3::3:a:
pos.-specific     C  ::3:7:::::::::::::::::::::::
probability       D  :7::::3::::33:a:::::::::::::
matrix            E  ::::::3::::3::::::::::::7:::
                  F  :::::::3:::::a::::7:::::::::
                  G  ::7:::::::::::::::::a:::::::
                  H  3::::::::::::::::::3:::3::::
                  I  :::::::::::::::::::::::::3::
                  K  ::::::::7:3::::3:::::3:::::a
                  L  :::::::::::::::3::::::::::::
                  M  :::::::::::::::::::::::::3::
                  N  :::::::::::37::::3::::::::::
                  P  :3:::7:::7::::::::::::::::::
                  Q  ::::::::::::::::::::::::::::
                  R  3::3::::3::::::::3::::::::::
                  S  :::::33:::::::::7:::::::::::
                  T  :::::::::::::::::::::3::::::
                  V  ::::3::7:37::::::::::::::3::
                  W  :::::::::::::::3::::::a3::::
                  Y  3::3::::::::::::::3::::3::::

         bits    5.9                       *     
                 5.3                       *     
                 4.7              *        *     
                 4.1              **     * *   * 
Relative         3.5 *** **   *   **   *** **  **
Entropy          2.9 ****** **** ********* ******
(94.0 bits)      2.3 ****************************
                 1.8 ****************************
                 1.2 ****************************
                 0.6 ****************************
                 0.0 ----------------------------

Multilevel           HDGACPDVKPVDNFDKSAFAGAWHEIAK
consensus            RPCRVSEFRVKED  LANYH K WAM  
sequence             Y  Y  S    N   W R   T Y V  
                                                 
                                                 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value                        Site          
-------------             ----- ---------            ----------------------------
BBP_PIEBR                     4  1.00e-31        NVY HDGACPEVKPVDNFDWSNYHGKWWEVAK YPNSVEKYGK
ICYA_MANSE                    5  1.12e-28       GDIF YPGYCPDVKPVNDFDLSAFAGAWHEIAK LPLENENQGK
RETB_BOVIN                    2  2.70e-21          E RDCRVSSFRVKENFDKARFAGTWYAMAK KDPEGLFLQD
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
BBP_PIEBR                           1e-31  3_[1]_142
ICYA_MANSE                        1.1e-28  4_[1]_157
RETB_BOVIN                        2.7e-21  1_[1]_154
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF HDGRCPDVKPVDNFDWSRFAGKWYEIAK width=28 seqs=3
BBP_PIEBR                (    4) HDGACPEVKPVDNFDWSNYHGKWWEVAK  1 
ICYA_MANSE               (    5) YPGYCPDVKPVNDFDLSAFAGAWHEIAK  1 
RETB_BOVIN               (    2) RDCRVSSFRVKENFDKARFAGTWYAMAK  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 28 n= 768 bayes= 7.65181 E= 1.5e-004 
  -179   -268   -226   -205      7   -247    380   -213   -160   -202   -113   -104   -202     11    220   -133   -151   -225   -138    188 
  -216   -386    335    -73   -371   -240   -199   -326   -279   -356   -267    -75    167   -146   -194   -181   -222   -327   -393   -369 
   -97    153   -277   -331   -377    372   -289   -325   -338   -381   -261   -219   -262   -254   -205   -136   -211   -295   -366   -400 
   120   -212   -167   -110     -1   -150     -3   -111    -66   -138    -49   -113   -127      6    261    -52    -65   -115   -143    193 
  -242    486   -509   -468   -349   -398   -408   -148   -499   -282   -211   -438   -390   -371   -343   -318   -258    -26   -466   -455 
   -86   -296   -258   -236   -310   -212   -220   -256   -247   -261   -204   -234    440   -128   -144     88   -127   -243   -385   -379 
  -124   -370    238    171   -329   -166   -121   -272   -136   -285   -178    -50   -167      4    -78    117   -109   -258   -360   -304 
  -104   -200   -381   -337    167   -306   -235     90   -348    -55    -14   -316   -248   -226   -204   -223   -110    297   -243   -172 
  -293   -397   -419   -332   -477   -365   -258   -331    325   -383   -273   -289   -326   -157    160   -305   -273   -393   -394   -440 
   -92   -286   -279   -244   -271   -230   -225   -151   -253   -208   -155   -262    435   -134   -147   -123   -136     62   -362   -352 
   -77   -211   -273   -202   -213   -253   -181     59     32   -130    -66   -223   -196    -96    -38   -167    -84    301   -304   -294 
  -192   -391    298    121   -368   -198   -153   -321   -213   -345   -243    113   -236    -74   -148   -134   -178   -317   -388   -346 
  -246   -359    145   -180   -354   -183    -86   -301   -251   -371   -268    356   -246   -124   -178    -92   -162   -348   -357   -344 
  -312   -287   -454   -447    429   -406   -331   -187   -472   -135   -135   -414   -322   -363   -348   -288   -346   -252   -189    -83 
  -299   -415    366   -112   -405   -316   -248   -364   -403   -411   -320    -90   -365   -258   -282   -268   -316   -376   -410   -408 
  -163   -274   -275   -213    -91   -252   -155    -95     63     74    -49   -206   -215    -70    -13   -164   -139   -140    466   -131 
   178   -161   -279   -269   -295   -125   -243   -245   -276   -283   -168   -173   -170   -163   -157    312     59   -196   -343   -340 
   124   -254    -99    -67   -235   -111    -42   -173    -29   -191    -86    169   -112     44    283    -24    -43   -161   -259   -219 
  -279   -277   -413   -397    399   -373   -138   -188   -413   -145   -129   -344   -299   -283   -271   -255   -299   -242   -103    168 
   290   -154   -205   -165   -211   -108    217   -168   -175   -201   -101   -151   -163    -63    -73    -22    -84   -108   -276   -210 
  -176   -370   -278   -342   -423    394   -306   -394   -350   -449   -312   -229   -304   -287   -218   -197   -294   -377   -379   -430 
   148   -221   -133    -68   -218   -132    -79   -137    124   -172    -64    -80   -100     31     44     19    188   -116   -259   -222 
  -381   -381   -432   -434   -127   -378   -344   -357   -437   -238   -232   -390   -373   -295   -268   -367   -354   -351    568   -198 
  -222   -269   -316   -305    101   -302    300   -202   -318   -184   -123   -209   -251   -121   -143   -194   -218   -229    366    262 
    23   -435    -99    328   -422   -272   -243   -326   -226   -357   -253   -227   -244    -63   -174   -200   -214   -311   -453   -415 
  -175   -245   -408   -375   -169   -342   -312    324   -369    -12    249   -332   -301   -254   -248   -250   -147    183   -306   -291 
   341   -132   -343   -301   -283   -113   -294   -208   -335   -248   -145   -289   -258   -221   -205    -24   -122   -116   -332   -368 
  -326   -410   -460   -401   -505   -404   -333   -352    339   -433   -317   -335   -358   -263     42   -363   -320   -436   -421   -487 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 28 nsites= 3 E= 1.5e-004 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.333333 
 0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.333333  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.333333 
 0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.333333  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000 
 0.000000  0.000000  0.333333  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000 
 0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000 
 0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333 
 0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.333333 
 0.333333  0.000000  0.000000  0.666667  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000  0.333333  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.333333  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif HDGRCPDVKPVDNFDWSRFAGKWYEIAK MEME-1 regular expression
--------------------------------------------------------------------------------
[HRY][DP][GC][ARY][CV][PS][DES][VF][KR][PV][VK][DEN][ND]FD[KLW][SA][ANR][FY][AH]G[AKT]W[HWY][EA][IMV]AK
--------------------------------------------------------------------------------




Time  0.42 secs.

********************************************************************************


********************************************************************************
MOTIF VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2	width =  42  sites =   2  llr = 218  E-value = 9.9e-004
********************************************************************************
--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 Description
--------------------------------------------------------------------------------
Simplified        A  :::::5::::::5::::::::::::5::::5:::::::::::
pos.-specific     C  :::::::::::::::::a::::::::::::::::::::::::
probability       D  :::::::a::::::::::5:5:a:::::5:::::::::::::
matrix            E  :::::::::::::::::::::5::::::::::::::::::5:
                  F  :5:::::::::::::::::::::::::::5::::::::::::
                  G  ::::::::::::::5::::::::::5:::::::::::::::a
                  H  ::::::::::::::::::::5:::::a::5::::::::::::
                  I  ::::::::::::5a::::::::::::::5:::5:::::::::
                  K  :::::::::a::::::::5::::aa::::::::::5:a::::
                  L  ::::a::::::::::::::::::::::::::::a:::::a::
                  M  ::::::::::::::::::::::::::::::::::::::::::
                  N  ::5:::::5:a:::5:5:::::::::::::::::::::::::
                  P  :5:::::::::::::::::::5::::::::::::::::::::
                  Q  :::::::::::::::::::::::::::5::::::::::::::
                  R  :::::::::::::::::::::::::::::::::::5::::::
                  S  :::::5:::::::::::::::::::::5::::::a:a:::::
                  T  ::::::a:::::::::::::::::::::::::::::::::5:
                  V  a::a::::::::::::::::::::::::::5:5:::::a:::
                  W  ::5::::::::::::::::::::::::::::a::::::::::
                  Y  ::::::::5::a:::a5::a::::::::::::::::::::::

         bits    5.9                                *          
                 5.3                  *        *    *          
                 4.7       *      *   *        *    *          
                 4.1 * **  **  ** * * * *  *   *  * *  * * *  *
Relative         3.5 ***** ****** * *** ****** ** * * ******* *
Entropy          2.9 ******************************************
(157.6 bits)     2.3 ******************************************
                 1.8 ******************************************
                 1.2 ******************************************
                 0.6 ******************************************
                 0.0 ------------------------------------------

Multilevel           VFNVLATDNKNYAIGYNCDYDEDKKAHQDFAWILSKSKVLEG
consensus             PW  S  Y   I N Y K HP   G SIHV V  R    T 
sequence                                                       
                                                               
                                                               
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value                               Site                 
-------------             ----- ---------            ------------------------------------------
ICYA_MANSE                  102  7.93e-48 FKFGQRVVNL VPWVLATDYKNYAINYNCDYHPDKKAHSIHAWILSKSKVLEG NTKEVVDNVL
BBP_PIEBR                    98  4.24e-47 LTYGGVTKEN VFNVLSTDNKNYIIGYYCKYDEDKKGHQDFVWVLSRSKVLTG EAKTAVENYL
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
ICYA_MANSE                        7.9e-48  101_[2]_46
BBP_PIEBR                         4.2e-47  97_[2]_34
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG width=42 seqs=2
ICYA_MANSE               (  102) VPWVLATDYKNYAINYNCDYHPDKKAHSIHAWILSKSKVLEG  1 
BBP_PIEBR                (   98) VFNVLSTDNKNYIIGYYCKYDEDKKGHQDFVWVLSRSKVLTG  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 20 w= 42 n= 698 bayes= 8.44294 E= 9.9e-004 
   -79   -197   -355   -318   -210   -299   -268    107   -341   -110    -67   -322   -234   -238   -197   -229   -101    331   -339   -344 
  -137   -239   -277   -259    326   -239   -146   -122   -264   -107    -86   -234    308   -139   -142   -141   -155   -151    -95    -24 
  -243   -321   -175   -279   -121   -223    -96   -239   -261   -226   -172    228   -262   -131   -126   -166   -184   -265    489   -152 
   -79   -197   -355   -318   -210   -299   -268    107   -341   -110    -67   -322   -234   -238   -197   -229   -101    331   -339   -344 
  -232   -281   -423   -355    -89   -354   -279     14   -351    312     78   -355   -259   -193   -199   -277   -203    -82   -245   -269 
   260   -124   -231   -211   -237    -73   -197   -179   -228   -221   -115   -161   -123   -111   -115    215     18   -110   -289   -286 
  -115   -208   -264   -265   -263   -222   -217   -136   -243   -236   -102   -136   -191   -130   -130     78    380   -138   -309   -322 
  -283   -407    363    -98   -394   -295   -235   -352   -376   -398   -307    -82   -341   -233   -263   -250   -296   -363   -401   -396 
  -147   -254    -80   -171     21   -153     82   -155   -172   -189   -105    285   -177    -52    -64    -70   -102   -191    -74    197 
  -305   -400   -419   -355   -479   -375   -305   -337    336   -408   -297   -310   -331   -224     52   -330   -294   -410   -407   -460 
  -290   -351   -175   -321   -339   -249    -79   -270   -296   -362   -255    396   -272   -163   -203   -117   -181   -336   -332   -353 
  -177   -240   -286   -271    130   -250     12   -148   -272   -147    -90   -220   -212   -153   -133   -164   -184   -183    -24    366 
   186   -147   -282   -245   -131   -169   -213    265   -247    -37      9   -228   -165   -135   -134    -90    -74    105   -242   -226 
  -227   -291   -398   -381   -193   -360   -348    379   -367    -11      8   -337   -320   -272   -264   -272   -181    100   -334   -306 
  -132   -312    -93   -193   -330    316   -121   -289   -216   -339   -227    220   -205   -115   -118    -85   -149   -292   -313   -322 
  -177   -240   -286   -271    130   -250     12   -148   -272   -147    -90   -220   -212   -153   -133   -164   -184   -183    -24    366 
  -147   -254    -80   -171     21   -153     82   -155   -172   -189   -105    285   -177    -52    -64    -70   -102   -191    -74    197 
  -352    503   -549   -513   -466   -488   -464   -376   -574   -454   -338   -497   -462   -440   -393   -414   -349   -449   -559   -570 
  -129   -328    242     -9   -297   -142   -105   -237    165   -262   -158    -42   -149     -4     21    -88   -109   -238   -296   -276 
  -177   -240   -286   -271    130   -250     12   -148   -272   -147    -90   -220   -212   -153   -133   -164   -184   -183    -24    366 
  -183   -327    287    -65   -253   -171    284   -276   -201   -289   -190     -4   -197    -16    -79   -118   -154   -273   -282   -182 
  -101   -319    -72    213   -284   -181   -145   -229   -148   -241   -161   -148    341     12    -70   -102   -119   -215   -319   -301 
  -283   -407    363    -98   -394   -295   -235   -352   -376   -398   -307    -82   -341   -233   -263   -250   -296   -363   -401   -396 
  -305   -400   -419   -355   -479   -375   -305   -337    336   -408   -297   -310   -331   -224     52   -330   -294   -410   -407   -460 
  -305   -400   -419   -355   -479   -375   -305   -337    336   -408   -297   -310   -331   -224     52   -330   -294   -410   -407   -460 
   199   -186   -237   -248   -298    312   -237   -239   -270   -284   -174   -191   -182   -169   -150    -53   -130   -169   -312   -340 
  -251   -299   -223   -251   -169   -257    478   -292   -278   -251   -155    -70   -221     34    -46   -163   -183   -289   -217    -71 
   -58   -241   -120    -57   -236   -135     -5   -183    -92   -192    -82    -53    -91    354     16    179     18   -185   -243   -234 
  -161   -273    270    -82   -205   -214   -177    215   -233   -119    -74    -88   -202   -113   -137   -161   -140     -8   -273   -263 
  -185   -239   -243   -252    281   -254    348   -145   -265   -129    -82   -121   -202    -31    -84   -154   -166   -174    -42    136 
   212   -142   -296   -257   -186   -157   -226     48   -277   -120    -55   -255   -177   -162   -152    -78    -74    246   -277   -283 
  -372   -376   -426   -428   -122   -371   -335   -347   -429   -233   -225   -383   -367   -289   -261   -360   -346   -344    567   -191 
  -159   -242   -393   -370   -194   -350   -324    329   -369    -32     -7   -335   -296   -267   -250   -262   -144    224   -335   -319 
  -232   -281   -423   -355    -89   -354   -279     14   -351    312     78   -355   -259   -193   -199   -277   -203    -82   -245   -269 
   -69   -199   -243   -264   -279   -169   -219   -249   -253   -287   -177   -124   -169   -158   -135    352    119   -256   -326   -308 
  -247   -353   -346   -266   -414   -302   -180   -299    268   -325   -228   -236   -261    -82    333   -237   -222   -342   -332   -379 
   -69   -199   -243   -264   -279   -169   -219   -249   -253   -287   -177   -124   -169   -158   -135    352    119   -256   -326   -308 
  -305   -400   -419   -355   -479   -375   -305   -337    336   -408   -297   -310   -331   -224     52   -330   -294   -410   -407   -460 
   -79   -197   -355   -318   -210   -299   -268    107   -341   -110    -67   -322   -234   -238   -197   -229   -101    331   -339   -344 
  -232   -281   -423   -355    -89   -354   -279     14   -351    312     78   -355   -259   -193   -199   -277   -203    -82   -245   -269 
   -93   -271    -46    252   -263   -166   -113   -176   -114   -220   -118    -96   -123     29    -40    -20    180   -162   -288   -264 
  -158   -352   -261   -321   -404    391   -289   -372   -331   -425   -294   -212   -283   -265   -201   -180   -272   -356   -365   -412 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 20 w= 42 nsites= 2 E= 9.9e-004 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000 
 0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000 
 0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.500000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.500000  0.000000  0.000000  0.000000 
 0.000000  0.000000  0.000000  0.000000  0.000000  1.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif VFWVLATDNKNYIIGYNCDYDPDKKGHQDFVWILSKSKVLEG MEME-2 regular expression
--------------------------------------------------------------------------------
V[FP][NW]VL[AS]TD[NY]KNY[AI]I[GN]Y[NY]C[DK]Y[DH][EP]DKK[AG]H[QS][DI][FH][AV]W[IV]LS[KR]SKVL[ET]G
--------------------------------------------------------------------------------




Time  0.72 secs.

********************************************************************************


********************************************************************************
SUMMARY OF MOTIFS
********************************************************************************

--------------------------------------------------------------------------------
	Combined block diagrams: non-overlapping sites with p-value < 0.0001
--------------------------------------------------------------------------------
SEQUENCE NAME            COMBINED P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
ICYA_MANSE                       3.48e-69  4_[1(1.12e-28)]_69_[2(7.93e-48)]_46
LACB_BOVIN                       6.18e-03  12_[1(4.84e-05)]_138
BBP_PIEBR                        1.38e-71  3_[1(1.00e-31)]_66_[2(4.24e-47)]_34
RETB_BOVIN                       1.91e-18  1_[1(2.70e-21)]_154
MUP2_MOUSE                       5.12e-02  180
--------------------------------------------------------------------------------

********************************************************************************


********************************************************************************
Stopped because requested number of motifs (2) found.
********************************************************************************

CPU: Timothys-iMac.local

********************************************************************************
