********************************************************************************
MEME - Motif discovery tool
********************************************************************************
MEME version 4.10.2 (Release date: Thu Sep 03 15:00:54 2015 -0700)

For further information on how to interpret these results or to get
a copy of the MEME software please access http://meme-suite.org .

This file may be used as input to the MAST algorithm for searching
sequence databases for matches to groups of motifs.  MAST is available
for interactive use and downloading at http://meme-suite.org .
********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey and Charles Elkan,
"Fitting a mixture model by expectation maximization to discover
motifs in biopolymers", Proceedings of the Second International
Conference on Intelligent Systems for Molecular Biology, pp. 28-36,
AAAI Press, Menlo Park, California, 1994.
********************************************************************************


********************************************************************************
TRAINING SET
********************************************************************************
DATAFILE= Puf3p-200.s
ALPHABET= ACGU
Sequence name            Weight Length  Sequence name            Weight Length  
-------------            ------ ------  -------------            ------ ------  
sacCer3_chrI_48232_48332 1.0000    100  sacCer3_chrI_71777_71877 1.0000    100  
sacCer3_chrI_72016_72116 1.0000    100  sacCer3_chrI_73291_73391 1.0000    100  
sacCer3_chrI_73321_73421 1.0000    100  sacCer3_chrI_73356_73456 1.0000    100  
sacCer3_chrI_79455_79555 1.0000    100  sacCer3_chrI_93336_93436 1.0000    100  
sacCer3_chrI_120749_1208 1.0000    100  sacCer3_chrI_142343_1424 1.0000    100  
sacCer3_chrI_142963_1430 1.0000    100  sacCer3_chrI_143283_1433 1.0000    100  
sacCer3_chrI_56912_57012 1.0000    100  sacCer3_chrI_74949_75049 1.0000    100  
sacCer3_chrI_90825_90925 1.0000    100  sacCer3_chrI_106130_1062 1.0000    100  
sacCer3_chrI_139363_1394 1.0000    100  sacCer3_chrI_139577_1396 1.0000    100  
sacCer3_chrI_141262_1413 1.0000    100  sacCer3_chrI_150820_1509 1.0000    100  
sacCer3_chrII_38816_3891 1.0000    100  sacCer3_chrII_93391_9349 1.0000    100  
sacCer3_chrII_111177_111 1.0000    100  sacCer3_chrII_146864_146 1.0000    100  
sacCer3_chrII_169390_169 1.0000    100  sacCer3_chrII_174563_174 1.0000    100  
sacCer3_chrII_236818_236 1.0000    100  sacCer3_chrII_236884_236 1.0000    100  
sacCer3_chrII_236995_237 1.0000    100  sacCer3_chrII_244253_244 1.0000    100  
sacCer3_chrII_256804_256 1.0000    100  sacCer3_chrII_256827_256 1.0000    100  
sacCer3_chrII_260488_260 1.0000    100  sacCer3_chrII_284345_284 1.0000    100  
sacCer3_chrII_316594_316 1.0000    100  sacCer3_chrII_333867_333 1.0000    100  
sacCer3_chrII_349356_349 1.0000    100  sacCer3_chrII_394835_394 1.0000    100  
sacCer3_chrII_409627_409 1.0000    100  sacCer3_chrII_436701_436 1.0000    100  
sacCer3_chrII_452695_452 1.0000    100  sacCer3_chrII_452727_452 1.0000    100  
sacCer3_chrII_453200_453 1.0000    100  sacCer3_chrII_479032_479 1.0000    100  
sacCer3_chrII_516288_516 1.0000    100  sacCer3_chrII_517185_517 1.0000    100  
sacCer3_chrII_528764_528 1.0000    100  sacCer3_chrII_536187_536 1.0000    100  
sacCer3_chrII_536233_536 1.0000    100  sacCer3_chrII_556313_556 1.0000    100  
sacCer3_chrII_556418_556 1.0000    100  sacCer3_chrII_556467_556 1.0000    100  
sacCer3_chrII_557902_558 1.0000    100  sacCer3_chrII_559558_559 1.0000    100  
sacCer3_chrII_596022_596 1.0000    100  sacCer3_chrII_605497_605 1.0000    100  
sacCer3_chrII_608754_608 1.0000    100  sacCer3_chrII_608929_609 1.0000    100  
sacCer3_chrII_608966_609 1.0000    100  sacCer3_chrII_623426_623 1.0000    100  
sacCer3_chrII_634861_634 1.0000    100  sacCer3_chrII_722332_722 1.0000    100  
sacCer3_chrII_731484_731 1.0000    100  sacCer3_chrII_741602_741 1.0000    100  
sacCer3_chrII_768644_768 1.0000    100  sacCer3_chrII_768698_768 1.0000    100  
sacCer3_chrII_781978_782 1.0000    100  sacCer3_chrII_10213_1031 1.0000    100  
sacCer3_chrII_88407_8850 1.0000    100  sacCer3_chrII_109955_110 1.0000    100  
sacCer3_chrII_110023_110 1.0000    100  sacCer3_chrII_110433_110 1.0000    100  
sacCer3_chrII_134063_134 1.0000    100  sacCer3_chrII_164029_164 1.0000    100  
sacCer3_chrII_177781_177 1.0000    100  sacCer3_chrII_186759_186 1.0000    100  
sacCer3_chrII_187866_187 1.0000    100  sacCer3_chrII_272689_272 1.0000    100  
sacCer3_chrII_296238_296 1.0000    100  sacCer3_chrII_338654_338 1.0000    100  
sacCer3_chrII_370786_370 1.0000    100  sacCer3_chrII_372002_372 1.0000    100  
sacCer3_chrII_376509_376 1.0000    100  sacCer3_chrII_395306_395 1.0000    100  
sacCer3_chrII_406476_406 1.0000    100  sacCer3_chrII_414085_414 1.0000    100  
sacCer3_chrII_418571_418 1.0000    100  sacCer3_chrII_419076_419 1.0000    100  
sacCer3_chrII_488771_488 1.0000    100  sacCer3_chrII_492162_492 1.0000    100  
sacCer3_chrII_502316_502 1.0000    100  sacCer3_chrII_531780_531 1.0000    100  
sacCer3_chrII_564432_564 1.0000    100  sacCer3_chrII_586486_586 1.0000    100  
sacCer3_chrII_591631_591 1.0000    100  sacCer3_chrII_598991_599 1.0000    100  
sacCer3_chrII_612086_612 1.0000    100  sacCer3_chrII_613283_613 1.0000    100  
sacCer3_chrII_617922_618 1.0000    100  sacCer3_chrII_664908_665 1.0000    100  
sacCer3_chrII_668411_668 1.0000    100  sacCer3_chrII_680669_680 1.0000    100  
sacCer3_chrII_681031_681 1.0000    100  sacCer3_chrII_681797_681 1.0000    100  
sacCer3_chrII_729667_729 1.0000    100  sacCer3_chrII_735628_735 1.0000    100  
sacCer3_chrII_735654_735 1.0000    100  sacCer3_chrII_743545_743 1.0000    100  
sacCer3_chrII_770259_770 1.0000    100  sacCer3_chrII_784956_785 1.0000    100  
sacCer3_chrIII_35863_359 1.0000    100  sacCer3_chrIII_52356_524 1.0000    100  
sacCer3_chrIII_60704_608 1.0000    100  sacCer3_chrIII_60735_608 1.0000    100  
sacCer3_chrIII_119154_11 1.0000    100  sacCer3_chrIII_139045_13 1.0000    100  
sacCer3_chrIII_240011_24 1.0000    100  sacCer3_chrIII_23904_240 1.0000    100  
sacCer3_chrIII_120853_12 1.0000    100  sacCer3_chrIII_141395_14 1.0000    100  
sacCer3_chrIII_158886_15 1.0000    100  sacCer3_chrIII_159033_15 1.0000    100  
sacCer3_chrIII_162837_16 1.0000    100  sacCer3_chrIII_163262_16 1.0000    100  
sacCer3_chrIII_172827_17 1.0000    100  sacCer3_chrIII_194342_19 1.0000    100  
sacCer3_chrIII_209832_20 1.0000    100  sacCer3_chrIII_250281_25 1.0000    100  
sacCer3_chrIII_261063_26 1.0000    100  sacCer3_chrIV_38771_3887 1.0000    100  
sacCer3_chrIV_45894_4599 1.0000    100  sacCer3_chrIV_45938_4603 1.0000    100  
sacCer3_chrIV_90803_9090 1.0000    100  sacCer3_chrIV_99241_9934 1.0000    100  
sacCer3_chrIV_109508_109 1.0000    100  sacCer3_chrIV_111058_111 1.0000    100  
sacCer3_chrIV_118555_118 1.0000    100  sacCer3_chrIV_130013_130 1.0000    100  
sacCer3_chrIV_133443_133 1.0000    100  sacCer3_chrIV_184968_185 1.0000    100  
sacCer3_chrIV_192324_192 1.0000    100  sacCer3_chrIV_233877_233 1.0000    100  
sacCer3_chrIV_246005_246 1.0000    100  sacCer3_chrIV_258889_258 1.0000    100  
sacCer3_chrIV_270000_270 1.0000    100  sacCer3_chrIV_293292_293 1.0000    100  
sacCer3_chrIV_309383_309 1.0000    100  sacCer3_chrIV_309415_309 1.0000    100  
sacCer3_chrIV_322970_323 1.0000    100  sacCer3_chrIV_336193_336 1.0000    100  
sacCer3_chrIV_371860_371 1.0000    100  sacCer3_chrIV_372547_372 1.0000    100  
sacCer3_chrIV_412985_413 1.0000    100  sacCer3_chrIV_413013_413 1.0000    100  
sacCer3_chrIV_428446_428 1.0000    100  sacCer3_chrIV_428482_428 1.0000    100  
sacCer3_chrIV_439325_439 1.0000    100  sacCer3_chrIV_449243_449 1.0000    100  
sacCer3_chrIV_453676_453 1.0000    100  sacCer3_chrIV_453710_453 1.0000    100  
sacCer3_chrIV_472669_472 1.0000    100  sacCer3_chrIV_490901_491 1.0000    100  
sacCer3_chrIV_503889_503 1.0000    100  sacCer3_chrIV_508734_508 1.0000    100  
sacCer3_chrIV_509148_509 1.0000    100  sacCer3_chrIV_509285_509 1.0000    100  
sacCer3_chrIV_509454_509 1.0000    100  sacCer3_chrIV_540425_540 1.0000    100  
sacCer3_chrIV_540508_540 1.0000    100  sacCer3_chrIV_552956_553 1.0000    100  
sacCer3_chrIV_564798_564 1.0000    100  sacCer3_chrIV_576910_577 1.0000    100  
sacCer3_chrIV_580425_580 1.0000    100  sacCer3_chrIV_592860_592 1.0000    100  
sacCer3_chrIV_600891_600 1.0000    100  sacCer3_chrIV_602048_602 1.0000    100  
sacCer3_chrIV_603412_603 1.0000    100  sacCer3_chrIV_632011_632 1.0000    100  
sacCer3_chrIV_632874_632 1.0000    100  sacCer3_chrIV_682181_682 1.0000    100  
sacCer3_chrIV_695255_695 1.0000    100  sacCer3_chrIV_704944_705 1.0000    100  
sacCer3_chrIV_705300_705 1.0000    100  sacCer3_chrIV_762742_762 1.0000    100  
sacCer3_chrIV_773623_773 1.0000    100  sacCer3_chrIV_840392_840 1.0000    100  
sacCer3_chrIV_893923_894 1.0000    100  sacCer3_chrIV_911306_911 1.0000    100  
sacCer3_chrIV_915932_916 1.0000    100  sacCer3_chrIV_915979_916 1.0000    100  
sacCer3_chrIV_917163_917 1.0000    100  sacCer3_chrIV_924868_924 1.0000    100  
sacCer3_chrIV_927369_927 1.0000    100  sacCer3_chrIV_929172_929 1.0000    100  
sacCer3_chrIV_937531_937 1.0000    100  sacCer3_chrIV_961374_961 1.0000    100  
sacCer3_chrIV_1055284_10 1.0000    100  sacCer3_chrIV_1068362_10 1.0000    100  
sacCer3_chrIV_1093820_10 1.0000    100  sacCer3_chrIV_1111675_11 1.0000    100  
********************************************************************************

********************************************************************************
COMMAND LINE SUMMARY
********************************************************************************
This information can also be useful in the event you wish to report a
problem with the MEME software.

command: meme -rna -nmotifs 3 -oc motif.Puf3p Puf3p-200.s 

model:  mod=         zoops    nmotifs=         3    evt=           inf
object function=  E-value of product of p-values
width:  minw=            8    maxw=           50
width:  wg=             11    ws=              1    endgaps=       yes
nsites: minsites=        2    maxsites=      200    wnsites=       0.8
theta:  spmap=         uni    spfuzz=        0.5
global: substring=     yes    branching=      no    wbranch=        no
em:     prior=   dirichlet    b=            0.01    maxiter=        50
        distance=    1e-05
data:   n=           20000    N=             200    shuffle=        -1

sample: seed=            0    ctfrac=         -1    maxwords=       -1
Letter frequencies in dataset:
A 0.323 C 0.170 G 0.142 U 0.365 
Background letter frequencies (from dataset with add-one prior applied):
A 0.323 C 0.170 G 0.142 U 0.365 
********************************************************************************


********************************************************************************
MOTIF  1 MEME	width =  10  sites =  64  llr = 539  E-value = 3.7e-031
********************************************************************************
--------------------------------------------------------------------------------
	Motif 1 Description
--------------------------------------------------------------------------------
Simplified        A  23:::a5a:a
pos.-specific     C  63::2:1:::
probability       G  :1:a::::::
matrix            U  23a:8:3:a:

         bits    2.8    *      
                 2.5    *      
                 2.3    *      
                 2.0    *      
Relative         1.7    *      
Entropy          1.4   ** * ***
(12.2 bits)      1.1   **** ***
                 0.8 * **** ***
                 0.6 * **** ***
                 0.3 * ********
                 0.0 ----------

Multilevel           CUUGUAAAUA
consensus            UC    U   
sequence              A        
                               
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value               Site 
-------------             ----- ---------            ----------
sacCer3_chrIV_632874_632     37  2.17e-06 CAGAAAUGAG CCUGUAAAUA UCAAUAACUU
sacCer3_chrIII_60735_608     12  2.17e-06 CGAUUUUUUU CCUGUAAAUA CAAACACAUG
sacCer3_chrIII_60704_608     43  2.17e-06 CGAUUUUUUU CCUGUAAAUA CAAACACAUG
sacCer3_chrIII_35863_359     47  2.17e-06 AGAGCCAAAU CCUGUAAAUA CUUUGUCUAC
sacCer3_chrII_722332_722     49  2.17e-06 AAUAAUAAUA CCUGUAAAUA UCUCAACAUA
sacCer3_chrII_536187_536     46  2.17e-06 GUUCGUUAUU CCUGUAAAUA AAGUUAUAUG
sacCer3_chrII_768698_768      9  3.99e-06   UCAAUAUG CGUGUAAAUA CUAGUUUUCG
sacCer3_chrII_768644_768     63  3.99e-06 CUUCAAUAUG CGUGUAAAUA CUAGUUUUCG
sacCer3_chrIV_937531_937     42  1.28e-05 UCCCAUUCGU CAUGUAAAUA UAUAAACUGU
sacCer3_chrIV_540425_540     46  1.28e-05 AGAUUUCGUA CUUGUAAAUA AAAUAGGUGA
sacCer3_chrIV_270000_270     38  1.28e-05 AUAACGCGAG CUUGUAAAUA UCUAUAUACC
sacCer3_chrII_784956_785     27  1.28e-05 CCGUUUCGUU CAUGUAAAUA UUCAAAUAUA
sacCer3_chrII_586486_586     46  1.28e-05 AUUAGAUAUU CUUGUAAAUA UAUGAGGUCU
sacCer3_chrII_110023_110     49  1.28e-05 CUCAAUAUCC CUUGUAAAUA AAAGGCAGAG
sacCer3_chrII_741602_741     45  1.28e-05 GUUUGGUAUC CUUGUAAAUA AAUAUGUGUG
sacCer3_chrII_608966_609     45  1.28e-05 UCCUUUUAUA CUUGUAAAUA UUUUUACCAG
sacCer3_chrII_608929_609     82  1.28e-05 UCCUUUUAUA CUUGUAAAUA UUUUUACCA 
sacCer3_chrIV_1111675_11     44  1.64e-05 AUUAUAGUAU CCUGUACAUA UAAAAUAACG
sacCer3_chrIII_209832_20     50  1.64e-05 CCACCCAUCU CCUGUAUAUA AGAAAAAUAG
sacCer3_chrIII_119154_11     61  1.64e-05 UAAACUUAAG CCUGUAUAUA GAAACUUAAU
sacCer3_chrIV_603412_603     57  4.05e-05 AUUAUUCUAA CAUGUACAUA CCUGUAUAGU
sacCer3_chrIV_372547_372     42  4.05e-05 AAGUCAUGGC CUUGUAUAUA CAAAUUAAAU
sacCer3_chrIV_99241_9934     35  4.05e-05 ACUAUUCAAU CAUGUACAUA CAUCAUCAAA
sacCer3_chrIII_158886_15     44  4.05e-05 CUGUCGUCUA CUUGUACAUA AUCACAGGGA
sacCer3_chrII_735654_735     72  4.05e-05 CGAACAUCCU CAUGUAUAUA ACCUAUUGUA
sacCer3_chrII_735628_735     46  4.05e-05 CGAACAUCCU CAUGUAUAUA ACCUAUUGUA
sacCer3_chrII_598991_599      6  4.05e-05      GAACA UCUGUAAAUA GCCAUUGCUU
sacCer3_chrII_177781_177     46  4.05e-05 GUUUAAACAU UCUGUAAAUA UUUAAACAUA
sacCer3_chrII_146864_146     45  4.05e-05 ACCAUGUAUA CAUGUAUAUA ACUAUUGAAA
sacCer3_chrIV_449243_449     44  4.96e-05 GCCUUUUGAU CAUGCAAAUA UAUUACGGUA
sacCer3_chrIV_246005_246     44  4.96e-05 AAAGAAUCAU ACUGUAAAUA CUUUUCAGAA
sacCer3_chrIV_90803_9090     39  4.96e-05 AAAAACUGUA CUUGCAAAUA AUCAUAUCAC
sacCer3_chrIV_552956_553     39  7.93e-05 AAUAUACGUU UAUGUAAAUA AUAUCUUUUU
sacCer3_chrII_596022_596     47  7.93e-05 CAGAGAUUAA UUUGUAAAUA AAAGCAGAAA
sacCer3_chrII_244253_244     56  7.93e-05 CUAUAUUCUA UAUGUAAAUA GUUUUUAUAU
sacCer3_chrII_111177_111     57  7.93e-05 AAUUCAUCUC UUUGUAAAUA GUGUUAUACC
sacCer3_chrIV_924868_924     52  1.09e-04 AUUUUACCCA AUUGUAAAUA GUAAAAGACC
sacCer3_chrIV_704944_705     44  1.09e-04 AAAAUUUGUC CUUGUAGAUA UUAAAUGGCU
sacCer3_chrIV_453710_453      3  1.09e-04         AG CGUGCAUAUA UAUUUUUAUC
sacCer3_chrIV_453676_453     37  1.09e-04 UCCUUUACAG CGUGCAUAUA UAUUUUUAUC
sacCer3_chrIV_133443_133     48  1.09e-04 CUAUCUUUCU AAUGUAAAUA AUUUCCAGUU
sacCer3_chrII_729667_729     49  1.09e-04 UCUUACUAAU UCUGUAUAUA AUAUAGCAUA
sacCer3_chrIV_258889_258     45  1.25e-04 GGUGCUCUCA UCUGCAAAUA UUUACCACGC
sacCer3_chrII_668411_668     45  1.25e-04 UUCAAGAUUA ACUGUAUAUA AAUAGAGAUG
sacCer3_chrII_134063_134     43  1.25e-04 AUAUAUUUUC CAUGCACAUA AAAUAGAAAU
sacCer3_chrII_664908_665     24  1.27e-04 UAGAUAUAUA ACUGCAAAUA CACACAUACA
sacCer3_chrI_56912_57012      7  1.28e-04     AAAGCU CGUGUAAGUA UCACUUUUAG
sacCer3_chrII_284345_284     47  1.32e-04 CAUAUAUCAA CUUGUAAGUA UCACAGUAAA
sacCer3_chrII_395306_395     81  1.40e-04 UAUAAGAGUA UGUGUACAUA AUAACAAUUU
sacCer3_chrIV_1068362_10     46  1.79e-04 AAUUUAAAAA UUUGUAUAUA AAAAAAUAUA
sacCer3_chrIII_23904_240     45  1.79e-04 UUCCGCUCUA UAUGUAUAUA UUUACGUAAC
sacCer3_chrIII_52356_524     74  1.79e-04 GUAUAUUUUC AGUGUAUAUA CAUACAUUCU
sacCer3_chrIV_503889_503     37  2.20e-04 AUUAUAUAUU CCUGUGAAUA UUUUUUAACU
sacCer3_chrIV_45938_4603      5  2.20e-04       UUAU AUUGUAUAUA AAUUUUGUUU
sacCer3_chrIV_45894_4599     49  2.20e-04 UAUUACUUAU AUUGUAUAUA AAUUUUGUUU
sacCer3_chrII_236995_237     34  2.20e-04 GAGUUGUAUA AAUGUAUAUA UAUAACUUUA
sacCer3_chrI_79455_79555     45  2.20e-04 UAAAUAGGUA AUUGUAUAUA AAAAUGUGAA
sacCer3_chrII_536233_536     57  2.39e-04 UCUUCUACUU ACUGCACAUA AUACUUCAUC
sacCer3_chrIV_293292_293     33  2.55e-04 UGCAUAAAGU UGUGUAGAUA UAAAUUUAAC
sacCer3_chrII_394835_394     15  2.73e-04 CUGAAUUUUA UAUGUAGAUA AAAUUUUAGU
sacCer3_chrIV_192324_192     38  2.99e-04 UAAAAUUAUC UAUGCAUAUA UAUAACUCAA
sacCer3_chrII_414085_414     77  2.99e-04 AAUACGUAUG UAUGCACAUA UACCUACAUA
sacCer3_chrII_528764_528     48  3.16e-04 UGAUAUUUCU CCUGUAAAUU UACCUGAAUG
sacCer3_chrII_110433_110     26  3.41e-04 GAACGUUUUC AUUGUAAGUA UCCAGAUUUU
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
sacCer3_chrIV_632874_632          2.2e-06  36_[1]_54
sacCer3_chrIII_60735_608          2.2e-06  11_[1]_79
sacCer3_chrIII_60704_608          2.2e-06  42_[1]_48
sacCer3_chrIII_35863_359          2.2e-06  46_[1]_44
sacCer3_chrII_722332_722          2.2e-06  48_[1]_42
sacCer3_chrII_536187_536          2.2e-06  45_[1]_45
sacCer3_chrII_768698_768            4e-06  8_[1]_82
sacCer3_chrII_768644_768            4e-06  62_[1]_28
sacCer3_chrIV_937531_937          1.3e-05  41_[1]_49
sacCer3_chrIV_540425_540          1.3e-05  45_[1]_45
sacCer3_chrIV_270000_270          1.3e-05  37_[1]_53
sacCer3_chrII_784956_785          1.3e-05  26_[1]_64
sacCer3_chrII_586486_586          1.3e-05  45_[1]_45
sacCer3_chrII_110023_110          1.3e-05  48_[1]_42
sacCer3_chrII_741602_741          1.3e-05  44_[1]_46
sacCer3_chrII_608966_609          1.3e-05  44_[1]_46
sacCer3_chrII_608929_609          1.3e-05  81_[1]_9
sacCer3_chrIV_1111675_11          1.6e-05  43_[1]_47
sacCer3_chrIII_209832_20          1.6e-05  49_[1]_41
sacCer3_chrIII_119154_11          1.6e-05  60_[1]_30
sacCer3_chrIV_603412_603            4e-05  56_[1]_34
sacCer3_chrIV_372547_372            4e-05  41_[1]_49
sacCer3_chrIV_99241_9934            4e-05  34_[1]_56
sacCer3_chrIII_158886_15            4e-05  43_[1]_47
sacCer3_chrII_735654_735            4e-05  71_[1]_19
sacCer3_chrII_735628_735            4e-05  45_[1]_45
sacCer3_chrII_598991_599            4e-05  5_[1]_85
sacCer3_chrII_177781_177            4e-05  45_[1]_45
sacCer3_chrII_146864_146            4e-05  44_[1]_46
sacCer3_chrIV_449243_449            5e-05  43_[1]_47
sacCer3_chrIV_246005_246            5e-05  43_[1]_47
sacCer3_chrIV_90803_9090            5e-05  38_[1]_52
sacCer3_chrIV_552956_553          7.9e-05  38_[1]_52
sacCer3_chrII_596022_596          7.9e-05  46_[1]_44
sacCer3_chrII_244253_244          7.9e-05  55_[1]_35
sacCer3_chrII_111177_111          7.9e-05  56_[1]_34
sacCer3_chrIV_924868_924          0.00011  51_[1]_39
sacCer3_chrIV_704944_705          0.00011  43_[1]_47
sacCer3_chrIV_453710_453          0.00011  2_[1]_88
sacCer3_chrIV_453676_453          0.00011  36_[1]_54
sacCer3_chrIV_133443_133          0.00011  47_[1]_43
sacCer3_chrII_729667_729          0.00011  48_[1]_42
sacCer3_chrIV_258889_258          0.00012  44_[1]_46
sacCer3_chrII_668411_668          0.00012  44_[1]_46
sacCer3_chrII_134063_134          0.00012  42_[1]_48
sacCer3_chrII_664908_665          0.00013  23_[1]_67
sacCer3_chrI_56912_57012          0.00013  6_[1]_84
sacCer3_chrII_284345_284          0.00013  46_[1]_44
sacCer3_chrII_395306_395          0.00014  80_[1]_10
sacCer3_chrIV_1068362_10          0.00018  45_[1]_45
sacCer3_chrIII_23904_240          0.00018  44_[1]_46
sacCer3_chrIII_52356_524          0.00018  73_[1]_17
sacCer3_chrIV_503889_503          0.00022  36_[1]_54
sacCer3_chrIV_45938_4603          0.00022  4_[1]_86
sacCer3_chrIV_45894_4599          0.00022  48_[1]_42
sacCer3_chrII_236995_237          0.00022  33_[1]_57
sacCer3_chrI_79455_79555          0.00022  44_[1]_46
sacCer3_chrII_536233_536          0.00024  56_[1]_34
sacCer3_chrIV_293292_293          0.00026  32_[1]_58
sacCer3_chrII_394835_394          0.00027  14_[1]_76
sacCer3_chrIV_192324_192           0.0003  37_[1]_53
sacCer3_chrII_414085_414           0.0003  76_[1]_14
sacCer3_chrII_528764_528          0.00032  47_[1]_43
sacCer3_chrII_110433_110          0.00034  25_[1]_65
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF 1 width=10 seqs=64
sacCer3_chrIV_632874_632 (   37) CCUGUAAAUA  1 
sacCer3_chrIII_60735_608 (   12) CCUGUAAAUA  1 
sacCer3_chrIII_60704_608 (   43) CCUGUAAAUA  1 
sacCer3_chrIII_35863_359 (   47) CCUGUAAAUA  1 
sacCer3_chrII_722332_722 (   49) CCUGUAAAUA  1 
sacCer3_chrII_536187_536 (   46) CCUGUAAAUA  1 
sacCer3_chrII_768698_768 (    9) CGUGUAAAUA  1 
sacCer3_chrII_768644_768 (   63) CGUGUAAAUA  1 
sacCer3_chrIV_937531_937 (   42) CAUGUAAAUA  1 
sacCer3_chrIV_540425_540 (   46) CUUGUAAAUA  1 
sacCer3_chrIV_270000_270 (   38) CUUGUAAAUA  1 
sacCer3_chrII_784956_785 (   27) CAUGUAAAUA  1 
sacCer3_chrII_586486_586 (   46) CUUGUAAAUA  1 
sacCer3_chrII_110023_110 (   49) CUUGUAAAUA  1 
sacCer3_chrII_741602_741 (   45) CUUGUAAAUA  1 
sacCer3_chrII_608966_609 (   45) CUUGUAAAUA  1 
sacCer3_chrII_608929_609 (   82) CUUGUAAAUA  1 
sacCer3_chrIV_1111675_11 (   44) CCUGUACAUA  1 
sacCer3_chrIII_209832_20 (   50) CCUGUAUAUA  1 
sacCer3_chrIII_119154_11 (   61) CCUGUAUAUA  1 
sacCer3_chrIV_603412_603 (   57) CAUGUACAUA  1 
sacCer3_chrIV_372547_372 (   42) CUUGUAUAUA  1 
sacCer3_chrIV_99241_9934 (   35) CAUGUACAUA  1 
sacCer3_chrIII_158886_15 (   44) CUUGUACAUA  1 
sacCer3_chrII_735654_735 (   72) CAUGUAUAUA  1 
sacCer3_chrII_735628_735 (   46) CAUGUAUAUA  1 
sacCer3_chrII_598991_599 (    6) UCUGUAAAUA  1 
sacCer3_chrII_177781_177 (   46) UCUGUAAAUA  1 
sacCer3_chrII_146864_146 (   45) CAUGUAUAUA  1 
sacCer3_chrIV_449243_449 (   44) CAUGCAAAUA  1 
sacCer3_chrIV_246005_246 (   44) ACUGUAAAUA  1 
sacCer3_chrIV_90803_9090 (   39) CUUGCAAAUA  1 
sacCer3_chrIV_552956_553 (   39) UAUGUAAAUA  1 
sacCer3_chrII_596022_596 (   47) UUUGUAAAUA  1 
sacCer3_chrII_244253_244 (   56) UAUGUAAAUA  1 
sacCer3_chrII_111177_111 (   57) UUUGUAAAUA  1 
sacCer3_chrIV_924868_924 (   52) AUUGUAAAUA  1 
sacCer3_chrIV_704944_705 (   44) CUUGUAGAUA  1 
sacCer3_chrIV_453710_453 (    3) CGUGCAUAUA  1 
sacCer3_chrIV_453676_453 (   37) CGUGCAUAUA  1 
sacCer3_chrIV_133443_133 (   48) AAUGUAAAUA  1 
sacCer3_chrII_729667_729 (   49) UCUGUAUAUA  1 
sacCer3_chrIV_258889_258 (   45) UCUGCAAAUA  1 
sacCer3_chrII_668411_668 (   45) ACUGUAUAUA  1 
sacCer3_chrII_134063_134 (   43) CAUGCACAUA  1 
sacCer3_chrII_664908_665 (   24) ACUGCAAAUA  1 
sacCer3_chrI_56912_57012 (    7) CGUGUAAGUA  1 
sacCer3_chrII_284345_284 (   47) CUUGUAAGUA  1 
sacCer3_chrII_395306_395 (   81) UGUGUACAUA  1 
sacCer3_chrIV_1068362_10 (   46) UUUGUAUAUA  1 
sacCer3_chrIII_23904_240 (   45) UAUGUAUAUA  1 
sacCer3_chrIII_52356_524 (   74) AGUGUAUAUA  1 
sacCer3_chrIV_503889_503 (   37) CCUGUGAAUA  1 
sacCer3_chrIV_45938_4603 (    5) AUUGUAUAUA  1 
sacCer3_chrIV_45894_4599 (   49) AUUGUAUAUA  1 
sacCer3_chrII_236995_237 (   34) AAUGUAUAUA  1 
sacCer3_chrI_79455_79555 (   45) AUUGUAUAUA  1 
sacCer3_chrII_536233_536 (   57) ACUGCACAUA  1 
sacCer3_chrIV_293292_293 (   33) UGUGUAGAUA  1 
sacCer3_chrII_394835_394 (   15) UAUGUAGAUA  1 
sacCer3_chrIV_192324_192 (   38) UAUGCAUAUA  1 
sacCer3_chrII_414085_414 (   77) UAUGCACAUA  1 
sacCer3_chrII_528764_528 (   48) CCUGUAAAUU  1 
sacCer3_chrII_110433_110 (   26) AUUGUAAGUA  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 10 n= 18200 bayes= 9.88709 E= 3.7e-031 
   -79    177  -1264    -64 
   -28     80    -18    -22 
 -1264  -1264  -1264    145 
 -1264  -1264    282  -1264 
 -1264    -12  -1264    121 
   161  -1264   -318  -1264 
    76    -44   -159    -38 
   156  -1264   -159  -1264 
 -1264  -1264  -1264    145 
   161  -1264  -1264   -454 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 10 nsites= 64 E= 3.7e-031 
 0.187500  0.578125  0.000000  0.234375 
 0.265625  0.296875  0.125000  0.312500 
 0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  1.000000  0.000000 
 0.000000  0.156250  0.000000  0.843750 
 0.984375  0.000000  0.015625  0.000000 
 0.546875  0.125000  0.046875  0.281250 
 0.953125  0.000000  0.046875  0.000000 
 0.000000  0.000000  0.000000  1.000000 
 0.984375  0.000000  0.000000  0.015625 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 1 regular expression
--------------------------------------------------------------------------------
[CU][UCA]UGUA[AU]AUA
--------------------------------------------------------------------------------




Time 41.78 secs.

********************************************************************************


********************************************************************************
MOTIF  2 MEME	width =  41  sites =  33  llr = 420  E-value = 2.0e-004
********************************************************************************
--------------------------------------------------------------------------------
	Motif 2 Description
--------------------------------------------------------------------------------
Simplified        A  112:12:2:::2:34121343244427:617:622:32522
pos.-specific     C  :2:1212422255221222311221112::::2222132::
probability       G  32:1:1:::31:2111::::1:::2111:::::13:1::13
matrix            U  6688868585723548765357542728493a262854485

         bits    2.8                                          
                 2.5                                          
                 2.3                                          
                 2.0                                          
Relative         1.7                                          
Entropy          1.4                                *         
(18.3 bits)      1.1                                *         
                 0.8    *  * *   *              * * *   *     
                 0.6 * *** *******  **          *****   *   * 
                 0.3 *************  ***** *** *********** ****
                 0.0 -----------------------------------------

Multilevel           UUUUUUUUUUUCCUAUUUUAUUUAAUAUAUAUAUGUUUAUU
consensus            G      C G AUAU  CAUAAAUG   U U C C ACU G
sequence                        U      CC   CU         U  A   
                                                       A      
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value                              Site                 
-------------             ----- ---------            -----------------------------------------
sacCer3_chrIV_336193_336     21  3.78e-10 UACUUUUUUU UUUUUUUUUUUACUGUUAUCAUAAAUAUAUAUACCUUAUUG UUGUUUGCAA
sacCer3_chrIV_309415_309     28  3.80e-09 UUUUCCUUCU UUUUUAUCUGUUCAAUUUCAUAAAUAAUAUAUAUGUACAAU GUAUAAACGG
sacCer3_chrIV_309383_309     60  3.80e-09 UUUUCCUUCU UUUUUAUCUGUUCAAUUUCAUAAAUAAUAUAUAUGUACAAU           
sacCer3_chrIV_915979_916     30  4.95e-09 CUAUUAGACC UUUCUGUUUUUCCUUUUUAUUUUUCUAUAUAUAAUUUAUUG GGUAUAUAAU
sacCer3_chrIII_162837_16     14  1.21e-08 GCGAGCCAUU UUAUUUCCUGUCCCCUUCAUCUUUGUUUAUAUCCAUUCUAG AACAUGAAUU
sacCer3_chrI_73356_73456      3  2.51e-08         AU GGUUUUUCUUUUCAACUCAAAUAAAGAUUUAUAAGUUACUU AAAUAACAUA
sacCer3_chrI_73321_73421     38  2.51e-08 AUAAAGACAU GGUUUUUCUUUUCAACUCAAAUAAAGAUUUAUAAGUUACUU AAAUAACAUA
sacCer3_chrIV_130013_130     28  3.18e-08 AUUUGUUAGA UGUCUUUUCUUCGUAUUUCAAAAAAUUUAUAUAGGCGUAUG UUAAUAAGAU
sacCer3_chrIII_52356_524     30  4.00e-08 ACCGUACUUA CCAUCUUCUCUCCUUUAUAUAUAUAUAUAUAUAUGUAUAUU UUCAGUGUAU
sacCer3_chrII_479032_479     59  4.00e-08 AUAUACCUCU UAUUUUUAUGUAUUAGUUAAUUAAGUAUUUUUAUCUAUCUG C         
sacCer3_chrII_681031_681     40  1.20e-07 GUCUUUUACU AUAUUUUUUUUCCCAGUUUAUUUUGUGCUUAUUUUCUCAUU GAGGAGAAGG
sacCer3_chrIV_929172_929      1  1.48e-07          . UUUUUUUUUUCAUUUUUUUUUUUUAUUCUUAUUUAUGUAUG AUACUUUAUU
sacCer3_chrII_488771_488      9  2.45e-07   CUGGUCCG GUUUUCUCUGCCCUCUCUUCUAUUCACUUUUUUUAUACUUU AUAUAAAAUU
sacCer3_chrII_453200_453     45  2.45e-07 AGCGAAGUAU UUUUUUUUCCUAGUUUUUAUGUAAAAAUAUAUUCAUUUUUU UCUCUACGCA
sacCer3_chrI_139363_1394     23  2.45e-07 GUAUAAUGAG GAAUUUUCCGAACGUUUUUACUUUAUAUAUAUAUAUACAUG UAACAUAUAU
sacCer3_chrII_88407_8850      7  3.30e-07     UACCAA UUUUUUCUUCUCUUCUCCUCAUCUCUUCAUAUAGUCUUAUA UAUCAUAUAU
sacCer3_chrII_556313_556     60  4.00e-07 AUCAUAUCAU UUUUUUCUCUGUUUAUUUCUUCUAGAACUUAUACCUGUCUU           
sacCer3_chrII_680669_680     53  7.65e-07 UUGGUCGCUU GAUGUUUCUCUCGUCUUCCCGUUCGCUCUUUUAUUUUUUUA UUUUUUU   
sacCer3_chrIV_509454_509     24  1.09e-06 UUAGAAACGA GCUUUUUUAUGCCCAUCGUCAUCUAUAUAUAUAUUUGUAUC ACUUUAAUAG
sacCer3_chrIV_911306_911     25  1.41e-06 CACAUGAAAU UCGUUUUUUGUCCUUUUUUUUCUCUUCUUUUUCUCUCCUGU UUCUUCUACC
sacCer3_chrI_56912_57012     33  1.41e-06 UUAGUUUACU UUUGCUUCCCUCUGUGUAUAUUCUUUAUAUAUGUAUUUAUU AUUUUAAUUG
sacCer3_chrIV_508734_508     14  1.54e-06 AACGAUAUCA GGUUGACAUUCCUUGUUUUCUUCAGCAUUAUUAUGUUCUUG UGGAUUAUUG
sacCer3_chrII_110023_110      4  1.54e-06        AGC UUUUUUUCUGUCGCUACUUCAUUCACACAAAUCAUCUCAAU AUCCCUUGUA
sacCer3_chrIV_439325_439     36  1.67e-06 AUACUUGUGA UGUGCCCAUUUACAUUUUUCUAUAAUAGAUUUACGUAUAUA AGUAAUGCUU
sacCer3_chrII_38816_3891     22  1.82e-06 UAUCUUAGAA UUUUUUUAUUUUGAUUAUUAUAUAUUAUUAUUAUUCUUAUG GUAAAUAAUG
sacCer3_chrIII_120853_12     44  1.98e-06 CCUCUGCAUA UUUUUCUUUCCUCAUGACCAUUUAGUAUUUAGCACUUAUUU AAUACAAUAA
sacCer3_chrIII_163262_16     21  2.15e-06 GCAAUUUAUU GUUUCUCUUGUAAUCUUAACUUCCCUUUUUUUCUCUUAUUG CGUCUUAUCU
sacCer3_chrIV_490901_491     29  3.20e-06 AUAUAUGUUG UUUCUGUUCUGCCAAUCUUUUUUAAUAUAUUUCUCAUGAUA GCUCCAUAAU
sacCer3_chrIII_261063_26     17  3.20e-06 AAACCUGAAC ACUUCGUCUUCCCCAUCAUCCGACUUGUAUAUCCGUUCAGU GUGUUUUUCU
sacCer3_chrII_370786_370     51  5.89e-06 UAUCUUUUAU AUAUUAUCUGGCCUAAAUUUUUACAUAUAAAUAUUUAUCAU AUUAUGACA 
sacCer3_chrII_591631_591     36  7.32e-06 UCUUGGACCU GCAUAAUUUUUAUACUUUUUCCUUUUAGAUAUAUGUACUUU UGGCUUAAUU
sacCer3_chrIII_139045_13     37  9.71e-06 UAUUUUAUUU UUUGAAUAUUUUUUAUUUAUAUACGUAUAUAUAGACUAUUA UUUAUCUUUU
sacCer3_chrII_333867_333     42  1.19e-05 UAUUAGGCUC UUUUUCUUUUUCUUUUACCAGACUUGGUUUUUUUCUCUCUU UAGUAAUUGU
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
sacCer3_chrIV_336193_336          3.8e-10  20_[2]_39
sacCer3_chrIV_309415_309          3.8e-09  27_[2]_32
sacCer3_chrIV_309383_309          3.8e-09  59_[2]
sacCer3_chrIV_915979_916            5e-09  29_[2]_30
sacCer3_chrIII_162837_16          1.2e-08  13_[2]_46
sacCer3_chrI_73356_73456          2.5e-08  2_[2]_57
sacCer3_chrI_73321_73421          2.5e-08  37_[2]_22
sacCer3_chrIV_130013_130          3.2e-08  27_[2]_32
sacCer3_chrIII_52356_524            4e-08  29_[2]_30
sacCer3_chrII_479032_479            4e-08  58_[2]_1
sacCer3_chrII_681031_681          1.2e-07  39_[2]_20
sacCer3_chrIV_929172_929          1.5e-07  [2]_59
sacCer3_chrII_488771_488          2.5e-07  8_[2]_51
sacCer3_chrII_453200_453          2.5e-07  44_[2]_15
sacCer3_chrI_139363_1394          2.5e-07  22_[2]_37
sacCer3_chrII_88407_8850          3.3e-07  6_[2]_53
sacCer3_chrII_556313_556            4e-07  59_[2]
sacCer3_chrII_680669_680          7.7e-07  52_[2]_7
sacCer3_chrIV_509454_509          1.1e-06  23_[2]_36
sacCer3_chrIV_911306_911          1.4e-06  24_[2]_35
sacCer3_chrI_56912_57012          1.4e-06  32_[2]_27
sacCer3_chrIV_508734_508          1.5e-06  13_[2]_46
sacCer3_chrII_110023_110          1.5e-06  3_[2]_56
sacCer3_chrIV_439325_439          1.7e-06  35_[2]_24
sacCer3_chrII_38816_3891          1.8e-06  21_[2]_38
sacCer3_chrIII_120853_12            2e-06  43_[2]_16
sacCer3_chrIII_163262_16          2.1e-06  20_[2]_39
sacCer3_chrIV_490901_491          3.2e-06  28_[2]_31
sacCer3_chrIII_261063_26          3.2e-06  16_[2]_43
sacCer3_chrII_370786_370          5.9e-06  50_[2]_9
sacCer3_chrII_591631_591          7.3e-06  35_[2]_24
sacCer3_chrIII_139045_13          9.7e-06  36_[2]_23
sacCer3_chrII_333867_333          1.2e-05  41_[2]_18
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF 2 width=41 seqs=33
sacCer3_chrIV_336193_336 (   21) UUUUUUUUUUUACUGUUAUCAUAAAUAUAUAUACCUUAUUG  1 
sacCer3_chrIV_309415_309 (   28) UUUUUAUCUGUUCAAUUUCAUAAAUAAUAUAUAUGUACAAU  1 
sacCer3_chrIV_309383_309 (   60) UUUUUAUCUGUUCAAUUUCAUAAAUAAUAUAUAUGUACAAU  1 
sacCer3_chrIV_915979_916 (   30) UUUCUGUUUUUCCUUUUUAUUUUUCUAUAUAUAAUUUAUUG  1 
sacCer3_chrIII_162837_16 (   14) UUAUUUCCUGUCCCCUUCAUCUUUGUUUAUAUCCAUUCUAG  1 
sacCer3_chrI_73356_73456 (    3) GGUUUUUCUUUUCAACUCAAAUAAAGAUUUAUAAGUUACUU  1 
sacCer3_chrI_73321_73421 (   38) GGUUUUUCUUUUCAACUCAAAUAAAGAUUUAUAAGUUACUU  1 
sacCer3_chrIV_130013_130 (   28) UGUCUUUUCUUCGUAUUUCAAAAAAUUUAUAUAGGCGUAUG  1 
sacCer3_chrIII_52356_524 (   30) CCAUCUUCUCUCCUUUAUAUAUAUAUAUAUAUAUGUAUAUU  1 
sacCer3_chrII_479032_479 (   59) UAUUUUUAUGUAUUAGUUAAUUAAGUAUUUUUAUCUAUCUG  1 
sacCer3_chrII_681031_681 (   40) AUAUUUUUUUUCCCAGUUUAUUUUGUGCUUAUUUUCUCAUU  1 
sacCer3_chrIV_929172_929 (    1) UUUUUUUUUUCAUUUUUUUUUUUUAUUCUUAUUUAUGUAUG  1 
sacCer3_chrII_488771_488 (    9) GUUUUCUCUGCCCUCUCUUCUAUUCACUUUUUUUAUACUUU  1 
sacCer3_chrII_453200_453 (   45) UUUUUUUUCCUAGUUUUUAUGUAAAAAUAUAUUCAUUUUUU  1 
sacCer3_chrI_139363_1394 (   23) GAAUUUUCCGAACGUUUUUACUUUAUAUAUAUAUAUACAUG  1 
sacCer3_chrII_88407_8850 (    7) UUUUUUCUUCUCUUCUCCUCAUCUCUUCAUAUAGUCUUAUA  1 
sacCer3_chrII_556313_556 (   60) UUUUUUCUCUGUUUAUUUCUUCUAGAACUUAUACCUGUCUU  1 
sacCer3_chrII_680669_680 (   53) GAUGUUUCUCUCGUCUUCCCGUUCGCUCUUUUAUUUUUUUA  1 
sacCer3_chrIV_509454_509 (   24) GCUUUUUUAUGCCCAUCGUCAUCUAUAUAUAUAUUUGUAUC  1 
sacCer3_chrIV_911306_911 (   25) UCGUUUUUUGUCCUUUUUUUUCUCUUCUUUUUCUCUCCUGU  1 
sacCer3_chrI_56912_57012 (   33) UUUGCUUCCCUCUGUGUAUAUUCUUUAUAUAUGUAUUUAUU  1 
sacCer3_chrIV_508734_508 (   14) GGUUGACAUUCCUUGUUUUCUUCAGCAUUAUUAUGUUCUUG  1 
sacCer3_chrII_110023_110 (    4) UUUUUUUCUGUCGCUACUUCAUUCACACAAAUCAUCUCAAU  1 
sacCer3_chrIV_439325_439 (   36) UGUGCCCAUUUACAUUUUUCUAUAAUAGAUUUACGUAUAUA  1 
sacCer3_chrII_38816_3891 (   22) UUUUUUUAUUUUGAUUAUUAUAUAUUAUUAUUAUUCUUAUG  1 
sacCer3_chrIII_120853_12 (   44) UUUUUCUUUCCUCAUGACCAUUUAGUAUUUAGCACUUAUUU  1 
sacCer3_chrIII_163262_16 (   21) GUUUCUCUUGUAAUCUUAACUUCCCUUUUUUUCUCUUAUUG  1 
sacCer3_chrIV_490901_491 (   29) UUUCUGUUCUGCCAAUCUUUUUUAAUAUAUUUCUCAUGAUA  1 
sacCer3_chrIII_261063_26 (   17) ACUUCGUCUUCCCCAUCAUCCGACUUGUAUAUCCGUUCAGU  1 
sacCer3_chrII_370786_370 (   51) AUAUUAUCUGGCCUAAAUUUUUACAUAUAAAUAUUUAUCAU  1 
sacCer3_chrII_591631_591 (   36) GCAUAAUUUUUAUACUUUUUCCUUUUAGAUAUAUGUACUUU  1 
sacCer3_chrIII_139045_13 (   37) UUUGAAUAUUUUUUAUUUAUAUACGUAUAUAUAGACUAUUA  1 
sacCer3_chrII_333867_333 (   42) UUUUUCUUUUUCUUUUACCAGACUUGGUUUUUUUCUCUCUU  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 41 n= 12000 bayes= 9.27043 E= 2.0e-004 
  -183   -249     95     73 
  -183    -17     10     73 
   -83  -1169   -222    111 
 -1169    -90    -22    111 
  -241    -17   -222    105 
   -83    -49    -64     73 
 -1169     10  -1169    116 
  -109    121  -1169     32 
  -341     10  -1169    111 
 -1169     10    110     50 
  -341    -17    -22     93 
   -42    160  -1169    -59 
  -341    168     10    -42 
   -25    -17   -122     50 
    28     10   -122     -1 
  -241   -149    -22    105 
  -109     10  -1169     87 
  -141     32   -222     80 
   -25     32  -1169     50 
    17     83  -1169    -13 
   -25    -49    -64     50 
   -61    -90   -222     87 
    17     10  -1169     32 
    39     32  -1169     -1 
    28    -49     78    -59 
  -109    -90    -64     87 
   104   -149    -64   -101 
 -1169     10   -122    105 
    83  -1169  -1169     22 
  -141  -1169  -1169    127 
   111  -1169  -1169    -27 
 -1169  -1169   -222    141 
    91     32   -222   -127 
  -109     10    -64     66 
   -61     51    110    -59 
  -341     10  -1169    111 
   -25   -149    -22     58 
   -61     97   -222     22 
    49     10  -1169     -1 
  -109  -1169   -122    111 
  -109   -249    110     50 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 41 nsites= 33 E= 2.0e-004 
 0.090909  0.030303  0.272727  0.606061 
 0.090909  0.151515  0.151515  0.606061 
 0.181818  0.000000  0.030303  0.787879 
 0.000000  0.090909  0.121212  0.787879 
 0.060606  0.151515  0.030303  0.757576 
 0.181818  0.121212  0.090909  0.606061 
 0.000000  0.181818  0.000000  0.818182 
 0.151515  0.393939  0.000000  0.454545 
 0.030303  0.181818  0.000000  0.787879 
 0.000000  0.181818  0.303030  0.515152 
 0.030303  0.151515  0.121212  0.696970 
 0.242424  0.515152  0.000000  0.242424 
 0.030303  0.545455  0.151515  0.272727 
 0.272727  0.151515  0.060606  0.515152 
 0.393939  0.181818  0.060606  0.363636 
 0.060606  0.060606  0.121212  0.757576 
 0.151515  0.181818  0.000000  0.666667 
 0.121212  0.212121  0.030303  0.636364 
 0.272727  0.212121  0.000000  0.515152 
 0.363636  0.303030  0.000000  0.333333 
 0.272727  0.121212  0.090909  0.515152 
 0.212121  0.090909  0.030303  0.666667 
 0.363636  0.181818  0.000000  0.454545 
 0.424242  0.212121  0.000000  0.363636 
 0.393939  0.121212  0.242424  0.242424 
 0.151515  0.090909  0.090909  0.666667 
 0.666667  0.060606  0.090909  0.181818 
 0.000000  0.181818  0.060606  0.757576 
 0.575758  0.000000  0.000000  0.424242 
 0.121212  0.000000  0.000000  0.878788 
 0.696970  0.000000  0.000000  0.303030 
 0.000000  0.000000  0.030303  0.969697 
 0.606061  0.212121  0.030303  0.151515 
 0.151515  0.181818  0.090909  0.575758 
 0.212121  0.242424  0.303030  0.242424 
 0.030303  0.181818  0.000000  0.787879 
 0.272727  0.060606  0.121212  0.545455 
 0.212121  0.333333  0.030303  0.424242 
 0.454545  0.181818  0.000000  0.363636 
 0.151515  0.000000  0.060606  0.787879 
 0.151515  0.030303  0.303030  0.515152 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 2 regular expression
--------------------------------------------------------------------------------
[UG]UUUUUU[UC]U[UG]U[CAU][CU][UA][AU]UU[UC][UAC][AUC][UA][UA][UA][AUC][AGU]UAU[AU]U[AU]U[AC]U[GCUA]U[UA][UCA][AU]U[UG]
--------------------------------------------------------------------------------




Time 73.85 secs.

********************************************************************************


********************************************************************************
MOTIF  3 MEME	width =  41  sites =   5  llr = 173  E-value = 3.1e-003
********************************************************************************
--------------------------------------------------------------------------------
	Motif 3 Description
--------------------------------------------------------------------------------
Simplified        A  :4::824aaa8:6:4::22::aa26a4868aa86a:2:::4
pos.-specific     C  :2:::4::::2::::6:4:::::::::::2::2::4:4::6
probability       G  :4:6:44::::4::646:::2::::::::::::::686:::
matrix            U  a:a42:2::::64a::448a8::84:624::::4::::aa:

         bits    2.8                                          
                 2.5                                          
                 2.3                                          
                 2.0                                     *    
Relative         1.7        ***     *     **  *    **  ****   
Entropy          1.4 * **   ***   ****  * **  *    **  ****** 
(49.8 bits)      1.1 * **   ***** ****  ****  *   **** *******
                 0.8 ****** ***** **** ****** * * **** *******
                 0.6 ***************** ***********************
                 0.3 *****************************************
                 0.0 -----------------------------------------

Multilevel           UAUGACAAAAAUAUGCGCUUUAAUAAUAAAAAAAAGGGUUC
consensus             G UUGG   CGU AGUUA G  AU AUUC  CU CAC  A
sequence              C   AU          A                       
                                                              
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 sites sorted by position p-value
--------------------------------------------------------------------------------
Sequence name             Start   P-value                              Site                 
-------------             ----- ---------            -----------------------------------------
sacCer3_chrIV_453710_453     26  3.32e-18 UUUUAUCUAC UGUGAGGAAAAGUUGCUCUUUAAUUAUAUAAAAAACGCUUA UGUAGCAUUG
sacCer3_chrIV_453676_453     60  3.32e-18 UUUUAUCUAC UGUGAGGAAAAGUUGCUCUUUAAUUAUAUAAAAAACGCUUA           
sacCer3_chrII_256827_256     25  3.19e-17 AGUUAUUUUU UAUUACAAAAAUAUAGGUUUUAAUAAAAAAAAAUAGGGUUC UAUUUGUUUU
sacCer3_chrII_256804_256     48  3.19e-17 AGUUAUUUUU UAUUACAAAAAUAUAGGUUUUAAUAAAAAAAAAUAGGGUUC UAUUUGUUUU
sacCer3_chrI_90825_90925     46  4.93e-14 UUCGAACAAU UCUGUAUAAACUAUGCGAAUGAAAAAUUACAACAAGAGUUC AACCAGCACG
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 block diagrams
--------------------------------------------------------------------------------
SEQUENCE NAME            POSITION P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
sacCer3_chrIV_453710_453          3.3e-18  25_[3]_34
sacCer3_chrIV_453676_453          3.3e-18  59_[3]
sacCer3_chrII_256827_256          3.2e-17  24_[3]_35
sacCer3_chrII_256804_256          3.2e-17  47_[3]_12
sacCer3_chrI_90825_90925          4.9e-14  45_[3]_14
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 in BLOCKS format
--------------------------------------------------------------------------------
BL   MOTIF 3 width=41 seqs=5
sacCer3_chrIV_453710_453 (   26) UGUGAGGAAAAGUUGCUCUUUAAUUAUAUAAAAAACGCUUA  1 
sacCer3_chrIV_453676_453 (   60) UGUGAGGAAAAGUUGCUCUUUAAUUAUAUAAAAAACGCUUA  1 
sacCer3_chrII_256827_256 (   25) UAUUACAAAAAUAUAGGUUUUAAUAAAAAAAAAUAGGGUUC  1 
sacCer3_chrII_256804_256 (   48) UAUUACAAAAAUAUAGGUUUUAAUAAAAAAAAAUAGGGUUC  1 
sacCer3_chrI_90825_90925 (   46) UCUGUAUAAACUAUGCGAAUGAAAAAUUACAACAAGAGUUC  1 
//

--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 position-specific scoring matrix
--------------------------------------------------------------------------------
log-odds matrix: alength= 4 w= 41 n= 12000 bayes= 11.4799 E= 3.1e-003 
  -897   -897   -897    145 
    31     23    150   -897 
  -897   -897   -897    145 
  -897   -897    208     13 
   131   -897   -897    -87 
   -69    123    150   -897 
    31   -897    150    -87 
   163   -897   -897   -897 
   163   -897   -897   -897 
   163   -897   -897   -897 
   131     23   -897   -897 
  -897   -897    150     72 
    89   -897   -897     13 
  -897   -897   -897    145 
    31   -897    208   -897 
  -897    182    150   -897 
  -897   -897    208     13 
   -69    123   -897     13 
   -69   -897   -897    113 
  -897   -897   -897    145 
  -897   -897     50    113 
   163   -897   -897   -897 
   163   -897   -897   -897 
   -69   -897   -897    113 
    89   -897   -897     13 
   163   -897   -897   -897 
    31   -897   -897     72 
   131   -897   -897    -87 
    89   -897   -897     13 
   131     23   -897   -897 
   163   -897   -897   -897 
   163   -897   -897   -897 
   131     23   -897   -897 
    89   -897   -897     13 
   163   -897   -897   -897 
  -897    123    208   -897 
   -69   -897    250   -897 
  -897    123    208   -897 
  -897   -897   -897    145 
  -897   -897   -897    145 
    31    182   -897   -897 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 position-specific probability matrix
--------------------------------------------------------------------------------
letter-probability matrix: alength= 4 w= 41 nsites= 5 E= 3.1e-003 
 0.000000  0.000000  0.000000  1.000000 
 0.400000  0.200000  0.400000  0.000000 
 0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  0.600000  0.400000 
 0.800000  0.000000  0.000000  0.200000 
 0.200000  0.400000  0.400000  0.000000 
 0.400000  0.000000  0.400000  0.200000 
 1.000000  0.000000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000 
 0.800000  0.200000  0.000000  0.000000 
 0.000000  0.000000  0.400000  0.600000 
 0.600000  0.000000  0.000000  0.400000 
 0.000000  0.000000  0.000000  1.000000 
 0.400000  0.000000  0.600000  0.000000 
 0.000000  0.600000  0.400000  0.000000 
 0.000000  0.000000  0.600000  0.400000 
 0.200000  0.400000  0.000000  0.400000 
 0.200000  0.000000  0.000000  0.800000 
 0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  0.200000  0.800000 
 1.000000  0.000000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000 
 0.200000  0.000000  0.000000  0.800000 
 0.600000  0.000000  0.000000  0.400000 
 1.000000  0.000000  0.000000  0.000000 
 0.400000  0.000000  0.000000  0.600000 
 0.800000  0.000000  0.000000  0.200000 
 0.600000  0.000000  0.000000  0.400000 
 0.800000  0.200000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000 
 1.000000  0.000000  0.000000  0.000000 
 0.800000  0.200000  0.000000  0.000000 
 0.600000  0.000000  0.000000  0.400000 
 1.000000  0.000000  0.000000  0.000000 
 0.000000  0.400000  0.600000  0.000000 
 0.200000  0.000000  0.800000  0.000000 
 0.000000  0.400000  0.600000  0.000000 
 0.000000  0.000000  0.000000  1.000000 
 0.000000  0.000000  0.000000  1.000000 
 0.400000  0.600000  0.000000  0.000000 
--------------------------------------------------------------------------------

--------------------------------------------------------------------------------
	Motif 3 regular expression
--------------------------------------------------------------------------------
U[AGC]U[GU][AU][CGA][AGU]AAA[AC][UG][AU]U[GA][CG][GU][CUA][UA]U[UG]AA[UA][AU]A[UA][AU][AU][AC]AA[AC][AU]A[GC][GA][GC]UU[CA]
--------------------------------------------------------------------------------




Time 103.17 secs.

********************************************************************************


********************************************************************************
SUMMARY OF MOTIFS
********************************************************************************

--------------------------------------------------------------------------------
	Combined block diagrams: non-overlapping sites with p-value < 0.0001
--------------------------------------------------------------------------------
SEQUENCE NAME            COMBINED P-VALUE  MOTIF DIAGRAM
-------------            ----------------  -------------
sacCer3_chrI_48232_48332         3.92e-01  100
sacCer3_chrI_71777_71877         9.96e-01  100
sacCer3_chrI_72016_72116         1.00e+00  100
sacCer3_chrI_73291_73391         1.55e-02  100
sacCer3_chrI_73321_73421         2.93e-06  37_[2(2.51e-08)]_22
sacCer3_chrI_73356_73456         5.36e-06  2_[2(2.51e-08)]_57
sacCer3_chrI_79455_79555         5.99e-02  100
sacCer3_chrI_93336_93436         9.68e-01  100
sacCer3_chrI_120749_1208         8.23e-01  100
sacCer3_chrI_142343_1424         3.67e-01  100
sacCer3_chrI_142963_1430         9.41e-01  100
sacCer3_chrI_143283_1433         3.88e-01  100
sacCer3_chrI_56912_57012         4.60e-05  32_[2(1.41e-06)]_27
sacCer3_chrI_74949_75049         6.35e-02  100
sacCer3_chrI_90825_90925         1.76e-10  45_[3(4.93e-14)]_14
sacCer3_chrI_106130_1062         9.40e-01  100
sacCer3_chrI_139363_1394         1.56e-04  22_[2(2.45e-07)]_37
sacCer3_chrI_139577_1396         9.96e-01  100
sacCer3_chrI_141262_1413         8.83e-01  100
sacCer3_chrI_150820_1509         9.99e-01  100
sacCer3_chrII_38816_3891         1.73e-04  21_[2(1.82e-06)]_38
sacCer3_chrII_93391_9349         6.92e-01  100
sacCer3_chrII_111177_111         1.13e-01  56_[1(7.93e-05)]_34
sacCer3_chrII_146864_146         6.24e-02  44_[1(4.05e-05)]_46
sacCer3_chrII_169390_169         3.16e-01  100
sacCer3_chrII_174563_174         9.94e-02  100
sacCer3_chrII_236818_236         6.21e-01  100
sacCer3_chrII_236884_236         4.19e-01  100
sacCer3_chrII_236995_237         6.71e-03  100
sacCer3_chrII_244253_244         1.62e-02  55_[1(7.93e-05)]_35
sacCer3_chrII_256804_256         3.71e-13  47_[3(3.19e-17)]_12
sacCer3_chrII_256827_256         3.62e-13  24_[3(3.19e-17)]_35
sacCer3_chrII_260488_260         7.33e-01  100
sacCer3_chrII_284345_284         1.28e-01  100
sacCer3_chrII_316594_316         4.86e-01  100
sacCer3_chrII_333867_333         8.52e-03  41_[2(1.19e-05)]_18
sacCer3_chrII_349356_349         4.03e-01  100
sacCer3_chrII_394835_394         4.19e-02  100
sacCer3_chrII_409627_409         1.97e-01  100
sacCer3_chrII_436701_436         9.04e-01  100
sacCer3_chrII_452695_452         3.72e-01  100
sacCer3_chrII_452727_452         3.53e-01  100
sacCer3_chrII_453200_453         1.32e-04  44_[2(2.45e-07)]_15
sacCer3_chrII_479032_479         5.74e-05  58_[2(4.00e-08)]_1
sacCer3_chrII_516288_516         6.90e-01  100
sacCer3_chrII_517185_517         4.90e-01  100
sacCer3_chrII_528764_528         2.57e-01  100
sacCer3_chrII_536187_536         4.48e-03  45_[1(2.17e-06)]_45
sacCer3_chrII_536233_536         7.46e-02  100
sacCer3_chrII_556313_556         1.56e-06  5_[3(2.69e-05)]_13_[2(4.00e-07)]
sacCer3_chrII_556418_556         7.51e-01  100
sacCer3_chrII_556467_556         3.08e-02  100
sacCer3_chrII_557902_558         5.73e-01  100
sacCer3_chrII_559558_559         7.27e-01  100
sacCer3_chrII_596022_596         1.92e-02  46_[1(7.93e-05)]_44
sacCer3_chrII_605497_605         2.15e-01  100
sacCer3_chrII_608754_608         9.45e-01  100
sacCer3_chrII_608929_609         4.71e-03  81_[1(1.28e-05)]_9
sacCer3_chrII_608966_609         5.08e-03  44_[1(1.28e-05)]_46
sacCer3_chrII_623426_623         9.29e-01  100
sacCer3_chrII_634861_634         4.89e-01  100
sacCer3_chrII_722332_722         2.70e-03  48_[1(2.17e-06)]_42
sacCer3_chrII_731484_731         5.67e-01  100
sacCer3_chrII_741602_741         2.22e-02  44_[1(1.28e-05)]_46
sacCer3_chrII_768644_768         3.10e-03  62_[1(3.99e-06)]_28
sacCer3_chrII_768698_768         4.99e-03  8_[1(3.99e-06)]_82
sacCer3_chrII_781978_782         8.83e-01  100
sacCer3_chrII_10213_1031         4.37e-01  100
sacCer3_chrII_88407_8850         4.58e-04  6_[2(3.30e-07)]_53
sacCer3_chrII_109955_110         2.23e-01  100
sacCer3_chrII_110023_110         1.13e-05  3_[2(1.54e-06)]_4_[1(1.28e-05)]_42
sacCer3_chrII_110433_110         1.36e-01  100
sacCer3_chrII_134063_134         1.08e-01  100
sacCer3_chrII_164029_164         7.79e-01  100
sacCer3_chrII_177781_177         2.77e-02  45_[1(4.05e-05)]_45
sacCer3_chrII_186759_186         6.78e-01  100
sacCer3_chrII_187866_187         6.79e-01  100
sacCer3_chrII_272689_272         1.87e-01  100
sacCer3_chrII_296238_296         2.73e-02  100
sacCer3_chrII_338654_338         6.56e-01  100
sacCer3_chrII_370786_370         2.61e-03  50_[2(5.89e-06)]_9
sacCer3_chrII_372002_372         3.64e-01  100
sacCer3_chrII_376509_376         1.00e+00  100
sacCer3_chrII_395306_395         1.49e-01  100
sacCer3_chrII_406476_406         4.77e-02  100
sacCer3_chrII_414085_414         9.30e-02  100
sacCer3_chrII_418571_418         9.06e-02  100
sacCer3_chrII_419076_419         9.52e-01  100
sacCer3_chrII_488771_488         2.02e-04  8_[2(2.45e-07)]_51
sacCer3_chrII_492162_492         6.07e-01  100
sacCer3_chrII_502316_502         9.15e-01  100
sacCer3_chrII_531780_531         9.98e-01  100
sacCer3_chrII_564432_564         8.03e-01  100
sacCer3_chrII_586486_586         1.09e-02  45_[1(1.28e-05)]_45
sacCer3_chrII_591631_591         1.12e-03  35_[2(7.32e-06)]_24
sacCer3_chrII_598991_599         9.91e-03  5_[1(4.05e-05)]_85
sacCer3_chrII_612086_612         1.78e-02  100
sacCer3_chrII_613283_613         9.95e-01  100
sacCer3_chrII_617922_618         1.55e-01  100
sacCer3_chrII_664908_665         5.71e-02  100
sacCer3_chrII_668411_668         2.93e-02  100
sacCer3_chrII_680669_680         2.24e-03  52_[2(7.65e-07)]_7
sacCer3_chrII_681031_681         3.61e-04  39_[2(1.20e-07)]_20
sacCer3_chrII_681797_681         9.43e-01  100
sacCer3_chrII_729667_729         1.14e-02  100
sacCer3_chrII_735628_735         2.31e-02  45_[1(4.05e-05)]_45
sacCer3_chrII_735654_735         1.35e-02  71_[1(4.05e-05)]_19
sacCer3_chrII_743545_743         1.97e-01  100
sacCer3_chrII_770259_770         6.36e-01  100
sacCer3_chrII_784956_785         2.36e-05  26_[1(1.28e-05)]_64
sacCer3_chrIII_35863_359         8.88e-03  46_[1(2.17e-06)]_44
sacCer3_chrIII_52356_524         5.73e-06  29_[2(4.00e-08)]_30
sacCer3_chrIII_60704_608         1.87e-04  42_[1(2.17e-06)]_48
sacCer3_chrIII_60735_608         1.87e-04  11_[1(2.17e-06)]_79
sacCer3_chrIII_119154_11         1.27e-02  60_[1(1.64e-05)]_30
sacCer3_chrIII_139045_13         2.83e-03  36_[2(9.71e-06)]_23
sacCer3_chrIII_240011_24         3.88e-01  100
sacCer3_chrIII_23904_240         9.86e-03  100
sacCer3_chrIII_120853_12         4.78e-04  43_[2(1.98e-06)]_16
sacCer3_chrIII_141395_14         6.67e-01  100
sacCer3_chrIII_158886_15         4.82e-02  43_[1(4.05e-05)]_47
sacCer3_chrIII_159033_15         9.43e-01  100
sacCer3_chrIII_162837_16         2.71e-05  13_[2(1.21e-08)]_46
sacCer3_chrIII_163262_16         5.60e-03  20_[2(2.15e-06)]_39
sacCer3_chrIII_172827_17         1.15e-01  100
sacCer3_chrIII_194342_19         2.53e-01  100
sacCer3_chrIII_209832_20         4.61e-03  49_[1(1.64e-05)]_41
sacCer3_chrIII_250281_25         8.93e-01  100
sacCer3_chrIII_261063_26         1.83e-03  16_[2(3.20e-06)]_43
sacCer3_chrIV_38771_3887         1.43e-02  100
sacCer3_chrIV_45894_4599         2.75e-02  100
sacCer3_chrIV_45938_4603         2.83e-02  100
sacCer3_chrIV_90803_9090         6.73e-04  1_[3(3.25e-05)]_58
sacCer3_chrIV_99241_9934         4.20e-02  34_[1(4.05e-05)]_56
sacCer3_chrIV_109508_109         9.63e-01  100
sacCer3_chrIV_111058_111         3.49e-02  100
sacCer3_chrIV_118555_118         2.82e-01  100
sacCer3_chrIV_130013_130         2.38e-06  27_[2(3.18e-08)]_32
sacCer3_chrIV_133443_133         1.28e-01  100
sacCer3_chrIV_184968_185         9.66e-01  100
sacCer3_chrIV_192324_192         9.75e-02  100
sacCer3_chrIV_233877_233         1.43e-01  100
sacCer3_chrIV_246005_246         3.74e-02  43_[1(4.96e-05)]_47
sacCer3_chrIV_258889_258         2.19e-02  100
sacCer3_chrIV_270000_270         2.48e-02  37_[1(1.28e-05)]_53
sacCer3_chrIV_293292_293         9.72e-03  100
sacCer3_chrIV_309383_309         4.82e-06  59_[2(3.80e-09)]
sacCer3_chrIV_309415_309         2.73e-06  27_[2(3.80e-09)]_32
sacCer3_chrIV_322970_323         2.59e-01  100
sacCer3_chrIV_336193_336         1.47e-06  20_[2(3.78e-10)]_39
sacCer3_chrIV_371860_371         7.19e-01  100
sacCer3_chrIV_372547_372         1.42e-02  41_[1(4.05e-05)]_49
sacCer3_chrIV_412985_413         5.20e-01  100
sacCer3_chrIV_413013_413         6.54e-01  100
sacCer3_chrIV_428446_428         1.84e-01  100
sacCer3_chrIV_428482_428         1.89e-01  100
sacCer3_chrIV_439325_439         6.45e-04  35_[2(1.67e-06)]_24
sacCer3_chrIV_449243_449         3.89e-02  43_[1(4.96e-05)]_47
sacCer3_chrIV_453676_453         5.77e-16  59_[3(3.32e-18)]
sacCer3_chrIV_453710_453         2.89e-16  25_[3(3.32e-18)]_34
sacCer3_chrIV_472669_472         9.58e-01  100
sacCer3_chrIV_490901_491         1.54e-03  28_[2(3.20e-06)]_31
sacCer3_chrIV_503889_503         3.39e-02  100
sacCer3_chrIV_508734_508         7.05e-04  13_[2(1.54e-06)]_46
sacCer3_chrIV_509148_509         6.54e-01  100
sacCer3_chrIV_509285_509         6.01e-01  100
sacCer3_chrIV_509454_509         8.74e-04  23_[2(1.09e-06)]_36
sacCer3_chrIV_540425_540         1.50e-02  45_[1(1.28e-05)]_45
sacCer3_chrIV_540508_540         6.46e-02  100
sacCer3_chrIV_552956_553         1.43e-02  38_[1(7.93e-05)]_52
sacCer3_chrIV_564798_564         4.84e-01  100
sacCer3_chrIV_576910_577         7.62e-01  100
sacCer3_chrIV_580425_580         1.35e-01  100
sacCer3_chrIV_592860_592         9.99e-01  100
sacCer3_chrIV_600891_600         9.93e-01  100
sacCer3_chrIV_602048_602         4.60e-02  100
sacCer3_chrIV_603412_603         1.95e-03  56_[1(4.05e-05)]_34
sacCer3_chrIV_632011_632         1.07e-01  100
sacCer3_chrIV_632874_632         2.66e-03  36_[1(2.17e-06)]_54
sacCer3_chrIV_682181_682         9.56e-01  100
sacCer3_chrIV_695255_695         5.84e-01  100
sacCer3_chrIV_704944_705         5.03e-02  100
sacCer3_chrIV_705300_705         9.60e-01  100
sacCer3_chrIV_762742_762         5.88e-01  100
sacCer3_chrIV_773623_773         9.99e-01  100
sacCer3_chrIV_840392_840         7.02e-02  100
sacCer3_chrIV_893923_894         2.68e-01  100
sacCer3_chrIV_911306_911         4.43e-03  24_[2(1.41e-06)]_35
sacCer3_chrIV_915932_916         6.09e-01  100
sacCer3_chrIV_915979_916         1.40e-06  29_[2(4.95e-09)]_30
sacCer3_chrIV_917163_917         3.17e-02  100
sacCer3_chrIV_924868_924         2.81e-02  100
sacCer3_chrIV_927369_927         4.92e-02  100
sacCer3_chrIV_929172_929         8.84e-05  [2(1.48e-07)]_59
sacCer3_chrIV_937531_937         2.80e-02  41_[1(1.28e-05)]_49
sacCer3_chrIV_961374_961         7.37e-01  100
sacCer3_chrIV_1055284_10         4.02e-01  100
sacCer3_chrIV_1068362_10         1.03e-02  100
sacCer3_chrIV_1093820_10         5.59e-01  100
sacCer3_chrIV_1111675_11         6.62e-03  43_[1(1.64e-05)]_47
--------------------------------------------------------------------------------

********************************************************************************


********************************************************************************
Stopped because requested number of motifs (3) found.
********************************************************************************

CPU: IMB12-010665

********************************************************************************
